| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0285 |
|---|
| Symbol | |
|---|
| ID | 4258336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 314894 |
|---|
| End bp | 315442 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638120892 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_736347 |
|---|
| Protein GI | 114045797 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AACATCAACT CGGATTCGTC TTCAGACAAG AAAACTGTGT CGGTTGCCAA
GCCTGCACTA TTGCCTGCCA AATCCACAAT GAACTTCCCG AAGACGTACG CTTTCGTAAA
GTCGACAGAT ACGAAGTACA ACGCGATGAC GGCGCAGTAG ACGTATGGCT AAGCCACTCC
TGTATGCACT GTGGCAATCC AGCCTGCTTA ATAGCCTGCC CAGCCCAAGC TTATACCGTT
CGCAGCGACG GACTCGTCGT GCTTAACCGC GATAAGTGTA CCGGCTGTGG TCTGTGTGTC
AGCGCCTGTC CTTACGATGC AGTCGTCATG CTGAAAACTG ATGGTAAAGC CGCTAAATGC
AATATGTGCA TAGAACTAAT TGATCAAGGT CTTAAGCCTG CGTGTGTTGA TGGCTGCCCA
GTTAAATGCC TCGATACCGA CCGCATTAAC CAACTTCTCG CTCAAAAACC TTCAGTCTCG
AAACAAGGGA TTGGTTACGG TAACTGCGTC ACTAAACCTA ACATGGTAAT TGTTAAGGAG
CGGCTATGA
|
|---|
| Protein sequence | MENKHQLGFV FRQENCVGCQ ACTIACQIHN ELPEDVRFRK VDRYEVQRDD GAVDVWLSHS
CMHCGNPACL IACPAQAYTV RSDGLVVLNR DKCTGCGLCV SACPYDAVVM LKTDGKAAKC
NMCIELIDQG LKPACVDGCP VKCLDTDRIN QLLAQKPSVS KQGIGYGNCV TKPNMVIVKE
RL
|
|---|
| |