| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0281 |
|---|
| Symbol | |
|---|
| ID | 4256217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 311282 |
|---|
| End bp | 312040 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 638120888 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_736343 |
|---|
| Protein GI | 114045793 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCA TGTTTGAATA CGACTCTAAA CTGGCGCAGT CACTTTCGCG GGTGCCAGTG
CATCAGCCCT CGATTATCCG CGTTATTCAA GGTGAGAAGT CGCTGCTTTG GCAAGATGAG
GCTCTCGCCG TGAATGCTGA GCAGCTATTA TTGTTACCCG CAGGAAGCCA TATCAGCTTT
GTCAATCGAC CGATGAGCGG GCGCTATCGA GCGGTGCAAC TCCTCTTACC CTATGATTTA
CCCCCAGGAA TTATGCTTGC GGCGACAGAC AGAGTAATGC CAAAGCCCAC GCAAACAATT
TCACGCTCGG TCGATTTTGC GTGGAATGCG TTACTGCACA GTCTGACCTT GGCGCTACCC
ACATCGGTGC AGATGCATTA CTTAGCTGCC TTGCTGCTCA GTCTGCCGCA GCAAATAAGT
GTGAATTGGC TCTACAGCCA TAAGCCTGCA AATGTGAGCC AAGCGGTGCT GGGCTTGCTC
GGACAACATC CTTCAGCCCC ATGGCAGCAA GAGGACATCG CCGACAAGTT GCATATGAGC
ACTGCCAGTT TAAGACGTAA ACTGGCACAG GAAGACACCA GCTTTAGGCA ATTGCTCGCC
GAAGTGCGCT TGTGTCAGGG CTTAACGCTG CTACAAAACT CTACGGATTC CGTGCTGCAA
ATTGCCTTAG CCTGCGGGTA TTTGTCGGCA GAAAAATTCT CGGCGCGCTT TAAGCAGGCC
TTTGGCCTGA CACCCGCCGC GTATCGCCGT ACCCTATGA
|
|---|
| Protein sequence | MIRMFEYDSK LAQSLSRVPV HQPSIIRVIQ GEKSLLWQDE ALAVNAEQLL LLPAGSHISF
VNRPMSGRYR AVQLLLPYDL PPGIMLAATD RVMPKPTQTI SRSVDFAWNA LLHSLTLALP
TSVQMHYLAA LLLSLPQQIS VNWLYSHKPA NVSQAVLGLL GQHPSAPWQQ EDIADKLHMS
TASLRRKLAQ EDTSFRQLLA EVRLCQGLTL LQNSTDSVLQ IALACGYLSA EKFSARFKQA
FGLTPAAYRR TL
|
|---|
| |