| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0277 |
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| Symbol | potE |
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| ID | 4256213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 306247 |
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| End bp | 307566 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120884 |
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| Product | putrescine transporter |
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| Protein accession | YP_736339 |
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| Protein GI | 114045789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAAT CAGCAAATAA AATTGGTGTC GTCCAATTAA CTATTATCAC CATAGTCAAC
ATGATGGGTT CAGGTATTAT CATGTTGCCT ACCCAATTAG CCCAAGTCGG TACTATTTCT
ATCCTTTCTT GGTTAGTCAC GGCGGCGGGT TCTACGGCGC TTGCCTATGC CTTTGCCAAA
TGCGGTATGT TCAGTAAAAA ATCGGGGGGG ATGGGCGGTT ACGCCGAATA TGCCTTCGGC
CGAAGCGGTA ACTTTATGGC GAACTACACC TATGCGGTAT CGCTTTTAAT CGCTAACGTC
GCTATCGCTA TCTCTGCCGT GGGTTATGCC GCGGTGCTAC TCGAAGTGAA CTTAAGCCCA
ATGGCTATCT GTCTTGCCAC TATTGGCGTG CTTTGGTTAG CAACAGTGGC TAACTTTGGT
GGCGCCCGCA TTACGGGTCG CGTGAGTAGC GTCACCGTGT GGGGGATTAT TCTGCCCGTG
ATTGGTGTGT CGTTAATCGG TTGGTTCTGG TTCGATATCG ACCTCTACAA AGGTGCTTGG
AACCCACATG AACTGCCTTT CTTTAAAGCC TTAGGCGGTT CAATCGCGAT GACTTTATGG
GCATTCCTTG GCTTAGAATC GGCTTGTGCT AACTCAGAGA CAGTTGATAA CCCGGAGAAA
AACGTTCCTA TCGCCGTAAT GGGCGGTACC TTAGGTGCAG CGCTTATCTA TATCGTTTCA
ACCAACGTGA TTGCCGGTAT TGTGCCTAAC GCCGACCTTG CCAACTCAAA CGCACCTTTC
GGTCTAGCCT TCGCGCAAAT GTTTAACCCT GTGGTCGGTA AAATCGTGAT GGCCTGCGCC
ATTATCTCCT GTACTGGCTC ACTGCTGGGT TGGCAGTTCA CTATCGCGCA AGTGTTTAAA
GCCTCTGCCG ATGAAGGCTT CTTCCCTAAA ATATTCTCTA AAGTCAGTAA AGCCGATGCA
CCGATTTGGG GTATGACCAT CATCGTCTCT ATCCAAACTC TGCTGTCTTT GATGACTATC
AGCCCATCAC TGAGCAAACA GTTTGAAGCC CTAGTTAACC TCGCCGTGGT GACTAACATT
GTGCCTTACA TCCTGTCGAT GGCAGCCCTA GGTGTAATGC AAAAACAACT CAAAGTACCA
GCGAACAAGG CCCGCGTTGC CAACGTGATT GCGGTTATCG GCGCCCTGTA TAGCTTCTAC
GCCCTCTATA GCTCTGGTGA AACCGCAGTG ATGTTAGGCG CTATCGCGAC CTTCTTCGGT
TGGACCATCT ATGGGGTGAT TTCCAATAAA ACACCAACAG CCGAGATCAA AGCAGCGTGA
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| Protein sequence | MSKSANKIGV VQLTIITIVN MMGSGIIMLP TQLAQVGTIS ILSWLVTAAG STALAYAFAK
CGMFSKKSGG MGGYAEYAFG RSGNFMANYT YAVSLLIANV AIAISAVGYA AVLLEVNLSP
MAICLATIGV LWLATVANFG GARITGRVSS VTVWGIILPV IGVSLIGWFW FDIDLYKGAW
NPHELPFFKA LGGSIAMTLW AFLGLESACA NSETVDNPEK NVPIAVMGGT LGAALIYIVS
TNVIAGIVPN ADLANSNAPF GLAFAQMFNP VVGKIVMACA IISCTGSLLG WQFTIAQVFK
ASADEGFFPK IFSKVSKADA PIWGMTIIVS IQTLLSLMTI SPSLSKQFEA LVNLAVVTNI
VPYILSMAAL GVMQKQLKVP ANKARVANVI AVIGALYSFY ALYSSGETAV MLGAIATFFG
WTIYGVISNK TPTAEIKAA
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