| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0273 |
|---|
| Symbol | |
|---|
| ID | 4256209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 300432 |
|---|
| End bp | 301652 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638120880 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736335 |
|---|
| Protein GI | 114045785 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGATAACG AACAGTTTCT CGAAAAGCGT AAATTTATCA TTAAGCTAGG CAAGGCTTTA
CATAAGTTTG GCACACCCGC TTACCGTCTT GAAACCCATT TGCAAACCGT CTCACGGACG
CTCGGAATCG AAGGTTATTT TTTAATCTCG CCGACCTCCA TGACCTTCGT GTTACAACAC
GATACCGATC AAGAGTATAA CCATGTTGCG CGGGTCAAAC CCGGCGAATT GGATTTAGGC
TCCCTCGCCC GCACCGATGA ACTGGTAGAT GAACTCACCT CGGGCAAACG CACACTCACC
GAAGCCTTAG ACAGGCTAGA AGAAATCGCC AACAAACCCA ACCCCTACGG CCCAGCATTA
ACCTGTTTCT CCTTTGGTAC CTCGGCGGCC GCCTTTGCCA TGTTGATGGG CACGGGTTGG
AACGATGTCT TTTGGTCAGG CTTGTTAGGC TTGCTAGTCT ATGGCTTTGT GTACCGCGCC
GAGCGTTCGA CGCGCATGGC AGAAGTCTTA GAGCCTTTCG CGACGATTGT TTGCGCCATT
GCCGCCTGCG CCATTGCCCG CATCGATCCC AATATTAATA TTCCCGTGGT GATCCTCTCC
TCCATCATCA TCTTTATTCC CGGCTTAGCC TTAACCTTAG GGTTGGCAGA ACTGGCGGCA
CGCGACCTGA TCTCGGGCAC AGCGCGGATT ATGGATGCCA GTATGTTGTT GTTTAAGTTG
TACTTTGGCG CAGTGCTGGG GATGGCGATA GGTAAAGCAT TCTTCGGTGA AGCTATTCAT
ATCGAACCTG AGGGCCTACC ACGCTGGGCG ATTTGGTCGG CGGTGCCTAT CCTGTCGATG
GCACTGGTGT TTATCTTTAA GGCACGGATG CAAGATTCAC CTTGGGGTGT ACTGGCGGGG
ATAGTGGCAT TCTTCTCCGC CATGTTAGGC GGGCACTTTT TTGGGGATTC TGTGGGGATC
TTCTTCGGCG CCTTGGCGGT AGGGGTTTAT TCCAATCTCT ATGCCCGCTG GATGAAGGCG
CCCGCCTCGA TTGCACTGCT GCAAGGTATT GTGATCTTAG TGCCCGGCAG TAAAACCTAC
ATAGGGCTGA ACGCGCTGAT CTCCGGCGAA ACCATGCTCA ACCAATCCCA TATTGGGTCG
CAGATCTTTT TGATCTTTAT GTCGCTTATC GCCGGACTGA TTTTTGCCAA CGTCGTGGTA
CCACCAAGAC GCACGCTGTA A
|
|---|
| Protein sequence | MDNEQFLEKR KFIIKLGKAL HKFGTPAYRL ETHLQTVSRT LGIEGYFLIS PTSMTFVLQH
DTDQEYNHVA RVKPGELDLG SLARTDELVD ELTSGKRTLT EALDRLEEIA NKPNPYGPAL
TCFSFGTSAA AFAMLMGTGW NDVFWSGLLG LLVYGFVYRA ERSTRMAEVL EPFATIVCAI
AACAIARIDP NINIPVVILS SIIIFIPGLA LTLGLAELAA RDLISGTARI MDASMLLFKL
YFGAVLGMAI GKAFFGEAIH IEPEGLPRWA IWSAVPILSM ALVFIFKARM QDSPWGVLAG
IVAFFSAMLG GHFFGDSVGI FFGALAVGVY SNLYARWMKA PASIALLQGI VILVPGSKTY
IGLNALISGE TMLNQSHIGS QIFLIFMSLI AGLIFANVVV PPRRTL
|
|---|
| |