| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0266 |
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| Symbol | |
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| ID | 4256202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 288939 |
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| End bp | 291455 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120873 |
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| Product | anaerobic dimethyl sulfoxide reductase subunit A |
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| Protein accession | YP_736328 |
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| Protein GI | 114045778 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGTA GAAGTTTTTT AAAAATGAGT GCCGCATTAA GTGCTGCTGC GGCCGTCACA
GGTTGTGACT CCAGCTCGAG TGATGTCGAT GTGGTACCAC CAACGCCTCC GGTTACAGAC
GGAGAGATCC AAACCTGGTC TTCCTGCCTG GTCAACTGTG GCTCTAACTG CCCGATCAAG
GTATTCAGTA AAGATGGGGT TATCACCCGC GTTGAGGCCG ACAATGAAAC CACTGACGAA
TATGGCTACA ACCACCAGAT CCGAGCTTGT GCGCGTGGAC GCTCACTCAG ACAACGCACC
TACGCAGCGG ATCGTTTAAA GACACCCATG AAACGTGTCG GTAAGCGCGG TGAAGGCAAA
TTTGTGCCCA TTACGTGGGA CGAAGCAGCC TCAACGATTG CCAGTGAACT GCAACGTATT
ACCGCCGAAT ACACAAACCG TTCAATTTTA AAACTATACG GTTCAGGTGC TTATTACGGT
TTCTCCAGCT CAAACTGCTT CAACCGCCTG CTGAATCTCA ACGGCGGCTT CCTGAATATT
TATGGTAACT ATTCTTGGGC GCAGCAAATT GAAGCCGCGG CGGCCACTTG GGGTGGCAGC
TCAACCAACG GCAGCTCTAT GGTCTGCGTT GCCGACAGCG ATCTGTTTTT AGGCATTGGT
TATAACCCTA GCGAAATGCG CCAAAGCGGT TCTGGCGAAG GTTACGATTA CCTGCAAGCT
ATTCAAAATA ACCCCAGCAT TGAAGTCATC ATGGTCGACC CAAGATATAC CGACTCCATG
GCGGGCAAGG AAGATCATTG GTATCCAATC CGTCCGGGCA CAGATGCCGC ATTTGCCGAG
GCTATCGCCT ATGAAATGAT TTCTTCTGGC TGGGTCGATG CCAACTCTAA AGCCTTCTTA
GATAAATATT GCGTCGGTTA TGACAAGGCC TCACTCGAAA AAACCAAAGC CGAGTTCGAA
GCATCGGGCG ATGCCACCAA ACTGGAATAC GCCAAGTTTA TCGATGTCGA AGAAAACTAC
CGCGATTACA TCCTAGGCGT GGGTAAATTC ACCGAGGCCA AAACACCTGC GTGGGCAGCA
ACCGTTTGTG GGATTTCGGA AGCCAACATC AAAGCTATCG CCCAGAAAGT CATGAATGCC
AAGGCGCCTT ATATCATCAT AGGTGCAGGT GTTAACCGCC ATGCAAATGG CGAACAGGCG
ATGCGCGCTT GCTATATGCT GCCCTTTTTA ACCGGCAAAG TGGGGCAACC AGGTGTCAAC
AACGGTGCCC TGCCAGTACA AGGCAGCATG AGCAAATCGA GCTTATCAGG CTTGTCGAAT
CCGATTAAAG AAGCCATTTC CTTCTTCACC TTCTCTGAAG CCATCGAACG CGGCGCGGAG
ATGACCGCCC GTAAAGATGG CGTAAGAGGA ATGCCAGATT TAGATACGCC ATTGGGTCAG
AATATTAAGG CCATTTTCGC CATTAACTCT AACTCCCTCG TCAACCAACA TGCCGACTCT
AACGGTACTT CGAAGATTTT GGAGGACGAT ACTAAGTGTG AGCTGATCGT GGTAGCCGAT
TGTTGGATGA CGCCTTCGGC ACGTTATGCC GATATCCTCC TGCCAGATAC CAGTTGGTTA
GAGTCAAATG ACCTAGTGGA TGGCAGCTAT GCCACAGGTC TCATGGGTTA CTTAGTCGCC
ATGAAGGCGG CGGTGAAGCC AATGTGGGAA TGTAAGTCCA TGTATGACAT GTGCGGCTTA
ATCGCACAAA AAATGGGCGT TTATCAGCAA TACTCCGAAG GTAAAGACGA AACTGCATGG
CTAAATCAGC TCTATGCTGG CACCCTGACT GCGCCTTCAA GCGCCAACGC CATTCCCGCA
TTACCAAGCT CTTATGAAGA AGCCCAAAAG ATTGGGGTGT TCCGCTCCTT CAATGGCACT
AAACGCATCG CCTTAGACAG CTATATCAAT GGCGGTAAAG CTCTCGGCAC ACCTACCGGT
AAAGTCGAAT TCTACTCACT CGATTTTGCG CAAAAAGCGG CGGAATGGGA GTTCGATGCA
AGCGTCAAAG GCAACTACAT CACCGCATTA CCCAAATACC AACCAACTTG GGAAGGCTAT
GAGGATGCCG ACACCATAGA CACTTACCCA CTGCAATTAA TGGGTTATCA CACTAAGGGC
CGTACTCACT CCAGCTATCA CAACGTGGCT TGGCTACGTG AAGCCGTTGA AGATGCAGTC
TGGATGAACC CGATAGATGC CAATGCGCGC GGCTTATCAC AGGGAGATAC GGTCCATGTA
TGGAGCCAGC GGGGCACCAT TGAAATCCCT GTACGCATCA CCCCAAGGGT TGCGCCAGGT
GTGGCCGCAC TGGGTCAAGG CGCTTGGTAT ACCCCAGATC CATCAGGCCG AATCGGTCCA
TCCGGCCATG TGATTGATAT TGGGGGCTGC ATCAACACGC TTACTCGCTA CCAACCTAGC
CCTGCCGCCA AAGGTAACCC ACAACACACT AATCGCGTGC AGATTGCTAA GGCTTAA
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| Protein sequence | MERRSFLKMS AALSAAAAVT GCDSSSSDVD VVPPTPPVTD GEIQTWSSCL VNCGSNCPIK
VFSKDGVITR VEADNETTDE YGYNHQIRAC ARGRSLRQRT YAADRLKTPM KRVGKRGEGK
FVPITWDEAA STIASELQRI TAEYTNRSIL KLYGSGAYYG FSSSNCFNRL LNLNGGFLNI
YGNYSWAQQI EAAAATWGGS STNGSSMVCV ADSDLFLGIG YNPSEMRQSG SGEGYDYLQA
IQNNPSIEVI MVDPRYTDSM AGKEDHWYPI RPGTDAAFAE AIAYEMISSG WVDANSKAFL
DKYCVGYDKA SLEKTKAEFE ASGDATKLEY AKFIDVEENY RDYILGVGKF TEAKTPAWAA
TVCGISEANI KAIAQKVMNA KAPYIIIGAG VNRHANGEQA MRACYMLPFL TGKVGQPGVN
NGALPVQGSM SKSSLSGLSN PIKEAISFFT FSEAIERGAE MTARKDGVRG MPDLDTPLGQ
NIKAIFAINS NSLVNQHADS NGTSKILEDD TKCELIVVAD CWMTPSARYA DILLPDTSWL
ESNDLVDGSY ATGLMGYLVA MKAAVKPMWE CKSMYDMCGL IAQKMGVYQQ YSEGKDETAW
LNQLYAGTLT APSSANAIPA LPSSYEEAQK IGVFRSFNGT KRIALDSYIN GGKALGTPTG
KVEFYSLDFA QKAAEWEFDA SVKGNYITAL PKYQPTWEGY EDADTIDTYP LQLMGYHTKG
RTHSSYHNVA WLREAVEDAV WMNPIDANAR GLSQGDTVHV WSQRGTIEIP VRITPRVAPG
VAALGQGAWY TPDPSGRIGP SGHVIDIGGC INTLTRYQPS PAAKGNPQHT NRVQIAKA
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