Gene Shewmr7_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0265 
Symbol 
ID4256201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp288266 
End bp288925 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content48% 
IMG OID638120872 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_736327 
Protein GI114045777 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAG AAACACAATA TGGTTTTTAC TTTGACAGCA GCAAATGTAC TGGATGTAAG 
GCGTGCCATA TCGCCTGTAA AGACCGCATG ACGGGACTTA TCCGTGCAAA TGATGGCAAC
GGTAGCGTTG CCAATCTTCC TGGGGTGCTG TGGCGCCGCG TCACCGAATA CGGTGGTGGC
AACTGGAGCC AGAATGCCGA TGGAAGTTTT GAGCAAAACG TTTTTGCATA TTACACATCA
ATAGGTTGTA ACCATTGCAG CGAACCCGTT TGCGTTAAAG CCTGCCCGAC GGGTGCCATG
CATAAACGCA AAGATAACGG TTTAGTGTTA GTGGAGTCAT CCATCTGTAT TGGTTGTGGC
AGCTGCGCAA GAGCCTGTCC CTATGACGCG CCACAATTAG ATACTCAGCG TAAAGTCATG
ACCAAGTGTG ATGGTTGTTA TGATCGACTC GCCGACGGCA AAAAACCGAT TTGCGTCAAT
GCCTGTCCAT TGCGGGCACT CGATTTTGAC ACTATGGAAA ACCTAAAAGC CAAATATGGT
GAAGGTGACG GCCACATTGC GCCGCTGCCC TCGTCATCTA TCACTTCTCC CAATCTGATT
GTCAAAAAGA ACCCAAATGC ACAATCGGGT GGGCAAGTGC TGAATTGGTC TGAAATTTAA
 
Protein sequence
MTQETQYGFY FDSSKCTGCK ACHIACKDRM TGLIRANDGN GSVANLPGVL WRRVTEYGGG 
NWSQNADGSF EQNVFAYYTS IGCNHCSEPV CVKACPTGAM HKRKDNGLVL VESSICIGCG
SCARACPYDA PQLDTQRKVM TKCDGCYDRL ADGKKPICVN ACPLRALDFD TMENLKAKYG
EGDGHIAPLP SSSITSPNLI VKKNPNAQSG GQVLNWSEI