| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0256 |
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| Symbol | |
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| ID | 4256770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 280219 |
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| End bp | 281091 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120863 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_736318 |
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| Protein GI | 114045768 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAGC TTCCTCCATT ACGCGCACTA CAAGTCTTTG AGACCGCCGC AAGGCAACAG
CATTTTTCCA AGGCTGCCGC CGAACTTTGC ATTACCCAAA GCGCAGTTTC ACACCAAGTG
CGTGTATTGG AGGAGTACTT TGGTGAACAA CTTTTTGATC GTCAGGGACG TAAATTACAA
CTCACGCCTA AAGGTCAAAG CTTATTTATT GAGTTAGAAA GGATTTTTAA TGAGTTAAGC
GACCTTAATC TCAAGATCCG TGACACCCCG AACCAACAAC TCTGTTTGGC GGTGTATAGC
TCTTTTGCGG TGAAATGGTT GATCCCAAGA TTAGCGGATT TTAGGCGCCA GTATCCCAGC
GTTAAAATTC GCCTCGAGAT GATCACCCAA GACCCCGATC TCAGCACCAG CACGGCCGAT
ATCTTTATCG CGGGCAAACT CAATCAGCGG GGCTATTGGC AACAGTTGCT GCATAAGGAG
CGGCTCATCC CAGTATGTAG CCCGAGTTTT TACCCCAAGT GGCGTGATAT TAACTTAAGC
AATTTCCAGC AACAGGCACT ACTGATTGTG GACGAGGGTC CGCTGGGACT CGATTGGCAT
AAATGGTCAT CGGCCCATCA GATCCCGTTG AATAACGAGC AACAACATAT TTTTAGCCAT
ATCGTAATGG CAATTGAGGC GGCGATTGCG GGCCAAGGCC TCGCCCTCGC CCCCGATTTT
ATGGTGGCAG GTGATATTAG CACCGGCAGA CTGGTTGCGG TTAATCTGCC CGATGTTCAT
ACGGGCTTTG AGTTTAGTTT TATCTGTAAG CAGCGCCGTC TCACAGAGCC TGCCATCGCC
GCCTTTTCCT CTTGGCTAAA ATCGCAGGCC TAA
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| Protein sequence | MRKLPPLRAL QVFETAARQQ HFSKAAAELC ITQSAVSHQV RVLEEYFGEQ LFDRQGRKLQ
LTPKGQSLFI ELERIFNELS DLNLKIRDTP NQQLCLAVYS SFAVKWLIPR LADFRRQYPS
VKIRLEMITQ DPDLSTSTAD IFIAGKLNQR GYWQQLLHKE RLIPVCSPSF YPKWRDINLS
NFQQQALLIV DEGPLGLDWH KWSSAHQIPL NNEQQHIFSH IVMAIEAAIA GQGLALAPDF
MVAGDISTGR LVAVNLPDVH TGFEFSFICK QRRLTEPAIA AFSSWLKSQA
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