Gene Shewmr7_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0254 
Symbol 
ID4256768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp278398 
End bp279081 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content51% 
IMG OID638120861 
Productphosphoglycolate phosphatase 
Protein accessionYP_736316 
Protein GI114045766 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAC AGATTAAAGC GATTGCCTTT GATCTCGACG GCACACTGAT TGACAGTGTG 
CCCGATCTTG CGGTCGCGAC CCAGGCGGCA CTCGCCGAAT TAGGTTTAGC AACGTGTACC
GAGGCACAGG TGAGAACTTG GGTGGGCAAT GGGGCTGAGA TGCTGATGCG TCGCGCCATG
AGCCACGCTT TAGGCACAGA CGTTGAGCAA ACGGCATTGG ATGCGGCTAT GCCCATCTTT
ATGCATCACT ATCAAGAAAA TCTTGAGAAG CACAGTGCAC TCTATGCCGA TGTGCACCAA
GTGCTGCAAA TCCTATTTGA TGCAGGATTT AAGCTGGCTG TGGTGACCAA CAAGCCCTAT
CGCTTTACCT TGCCTTTGCT TGAAGCCTTT AAGATTAATG ACTTCTTTAG CTTAGTGCTT
GGCGGCGATT CGTTGGCGAA GATGAAGCCC GATCCATTAC CGCTCGAGCA TCTATTAGCC
GAATGGCAAC TCGATAAAAC TGAGTTGTTG ATGGTGGGCG ATTCTAAAAA TGACATTTTA
GCGGCGAAAG CGGCGGGTGT TGCATCAATC GGCTTGACCT ATGGCTACAA CTACGGTGAA
GATATTGGGC TCACTGGCCC TGACGCTGTA TGCGAGCAGT TTGCCGAGAT CCTGCGCTGG
CTAAATCTCG CTCAGCCAGT TTAA
 
Protein sequence
MREQIKAIAF DLDGTLIDSV PDLAVATQAA LAELGLATCT EAQVRTWVGN GAEMLMRRAM 
SHALGTDVEQ TALDAAMPIF MHHYQENLEK HSALYADVHQ VLQILFDAGF KLAVVTNKPY
RFTLPLLEAF KINDFFSLVL GGDSLAKMKP DPLPLEHLLA EWQLDKTELL MVGDSKNDIL
AAKAAGVASI GLTYGYNYGE DIGLTGPDAV CEQFAEILRW LNLAQPV