| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0241 |
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| Symbol | |
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| ID | 4256071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 265165 |
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| End bp | 267684 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120848 |
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| Product | 1A family penicillin-binding protein |
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| Protein accession | YP_736303 |
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| Protein GI | 114045753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTGGT TAAAACGTAT TGTTATAGCT CTATTCAGTC TAGCCCTTTT GGGCGTAGGC
GCCATTGTTG CAGCATACTT TTATGTTTTG CCGGATCTGC CGGATGTTTC GACATTAAAA
AATGTGCAAT TACAAACACC TTTGCGCATT TACAGTAGCG ACGGCAAGCT CATTTCTCAG
TTTGGTGAGA AGCGTCGCAT TCCGCTGAAA CTCGAAGAAG TGCCTAAACC GCTGCTCCAA
GCCTTCCTCG CCACCGAGGA TGCGCGCTTT TATGAGCACG GCGGCATCGA TCCTGTTGGG
GTGATACGCG CCGCAATCGT CATGCTCACC ACGGGTGAGA AGAAGCAAGG TGCGAGTACC
ATCACCATGC AGGTGGCGCG TAACTTCTTC CTGACCCGCG ACAAGACCAT TATTCGTAAA
GTGAAGGAAA TTTTTATTTC CTACCACATC GAGCAATTGT TAACTAAAGA TGAGATTTTA
GAACTCTACG TTAACCGTAT TTATTTAGGT CAGAGAGCCT ATGGTGTCGG CGCGGCTGCT
CAAGTGTATT TTGGTAAAAA CGTTCAAGAT CTGACGCTTT CCGAAATGAG TATGATCGCG
GGTCTCCCTA AAGCACCGTC AACCCTAAAT CCTATTACCT CCCCTTCACG TGCACTCGCA
CGCCGCAACG TTGTATTGAT GCGAATGAAC GAAGTGGGTT ACATCAGCAA GGCAGAATAC
CAAGCGGCAA TGCAAGAACC GCTTGTCGCT AAATACCATG GTGCTGAAAT AGACCTCTAT
GCCCCTTATA TCTCTGAGAT GGCTCGGGAT TACATGGTGC AAAAATATGG TGAAGAAGAG
GCCTATACCA ATGGCTATAA CGTCTACACC ACAATTTCAT CAGAGCAGCA ACTGCTAGCA
CAGCAAGCAT TACGCAATAA CGTCTATGCC TATGATGAGC GCCACGGTTA CCGTGGTCCT
GCGGCAGTTT TATGGACCGA CACTAAGCCA GACGATGCAC AAATCAAAGC CGAGCTCGCT
AAAATTACGC CTGTACAAGA GTTGCAACCC GCTGCGGTAT TAAGCATCGA TGGACAGCAA
GCCAGTGTGT TAACCGCCAA GGGCGAAACC AAAGTCATCA AATGGGATGG CCTAAAATGG
GCGCGTAAAT TTATCACCGA TAAACGCCAA GGCTCGGTGC CAAAATCGGC TTCGGATATG
CTAAAAGTCG GTGAGCGCAT TTGGATCCGC GATAACGGTC AATACTTACA ATTATCGCAA
GTGCCAGAAG TGGCCAGTGC CACTGTTGCA CTCGATCCTA CAAATGGTGC TATCCGTACC
TTAGTAGGTG GTTACAGCTT CAGCCAAAGC CAATACAACC GCGTAACCCA AGCGAAACGT
CAATTAGGTT CGAATATTAA ACCTTTCATC TATGCTGCGG CATTAGAGAA AGGCTTTACG
CTCGCGACTC TGATTAACAA CGCACCGATT AACAAACCCG ATATTAGCCA AGGTACTGCG
TGGCGTCCTA AAAACTCGCC CGATATCTAT GGCGGTCCGA CCCGCCTGCG TGTGGGCTTA
GCGCAATCGA TCAACGTGAT GTCAGTTCGT GCCATGCGCC ATATTGGTTT AGATGCAGCC
ATCGCCGAAT TGACTAAGTT TGGCTTTGAT CCTAACGACT TACCTCGTAA CGAGTCGTTA
GCCTTAGGTT CTCCTTCGGT CACCCCACTG CAAGTGGCAA CCGCTTTCAA CGTGTTCGCA
AACGGTGGCT TCTTGGTTGA ACCTTACTAT ATCGAACGAG TAGAAGACTC CTTCGGTAAT
GTAATTGAGA AGGCAAATCC GACTTTGGCC TGTAAGCCTA ACAACAGCTC TGTGCAGCCT
AGCAGCGATC CAATGAGTTT TGGTGAGCCA ACCACTCCAA CCGATGAGCC TGTCGCCCAT
TGCTTCGAGC AAACAGGCCG TTATGCTCCG CAAATTATCT CTGAACAAAC GGCATTCCTG
ATCACCGAAG CGCTGAAGAG CGTGATCTGG GGTGGTGGCG ATTGGAGTAA AGGCACAGGC
TGGCAAGGTA CAGCTTGGCG TGCTGCGCAG CTAATCAAGC GTCATGATAT TGCAGGTAAA
ACGGGTACAA CCAACGAATC ACGCGATACT TGGTTCAGTG GTTTTGGTCC GACACTGACC
AGCACCTTCT GGGTTGGGTT TGATGACCAT GGTCGTCAGT TAGGCAGAAC CGCATGGAAC
TCCAACGGTG AGAAGGATCA AATCACGGGT ACCGAGGCGG GCGCTAAGAC CGCAGGCCCA
GGCTGGAACG AGTTTATGAA TAACGTGCTG AAGGGCGTAC CCGAAACCAC AGCGATTCCG
CCAGAAGGGA TTGTCTCGGT GCGGATCGAT CTGGCGACCG GCAAGTTGAC TCGTAAGACT
GACTACACTA GCGCATTTGA ATACTTTATC TCGGGCACTG AACCTAAGGA ATATATCAGT
GAAAGCCAAG ATGAAAACAA CCTATTCATC GATGCGCCGA CAGACGATTT ATTCCAATAG
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| Protein sequence | MKWLKRIVIA LFSLALLGVG AIVAAYFYVL PDLPDVSTLK NVQLQTPLRI YSSDGKLISQ
FGEKRRIPLK LEEVPKPLLQ AFLATEDARF YEHGGIDPVG VIRAAIVMLT TGEKKQGAST
ITMQVARNFF LTRDKTIIRK VKEIFISYHI EQLLTKDEIL ELYVNRIYLG QRAYGVGAAA
QVYFGKNVQD LTLSEMSMIA GLPKAPSTLN PITSPSRALA RRNVVLMRMN EVGYISKAEY
QAAMQEPLVA KYHGAEIDLY APYISEMARD YMVQKYGEEE AYTNGYNVYT TISSEQQLLA
QQALRNNVYA YDERHGYRGP AAVLWTDTKP DDAQIKAELA KITPVQELQP AAVLSIDGQQ
ASVLTAKGET KVIKWDGLKW ARKFITDKRQ GSVPKSASDM LKVGERIWIR DNGQYLQLSQ
VPEVASATVA LDPTNGAIRT LVGGYSFSQS QYNRVTQAKR QLGSNIKPFI YAAALEKGFT
LATLINNAPI NKPDISQGTA WRPKNSPDIY GGPTRLRVGL AQSINVMSVR AMRHIGLDAA
IAELTKFGFD PNDLPRNESL ALGSPSVTPL QVATAFNVFA NGGFLVEPYY IERVEDSFGN
VIEKANPTLA CKPNNSSVQP SSDPMSFGEP TTPTDEPVAH CFEQTGRYAP QIISEQTAFL
ITEALKSVIW GGGDWSKGTG WQGTAWRAAQ LIKRHDIAGK TGTTNESRDT WFSGFGPTLT
STFWVGFDDH GRQLGRTAWN SNGEKDQITG TEAGAKTAGP GWNEFMNNVL KGVPETTAIP
PEGIVSVRID LATGKLTRKT DYTSAFEYFI SGTEPKEYIS ESQDENNLFI DAPTDDLFQ
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