Gene Shewmr7_0239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0239 
Symbol 
ID4256069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp262429 
End bp263652 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content50% 
IMG OID638120846 
Productargininosuccinate synthase 
Protein accessionYP_736301 
Protein GI114045751 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCG AGAACAAAAA CACTGGCGTG AAAAAAGTCG TTTTAGCCTA TTCGGGTGGT 
CTAGATACTT CGGCCATTAT TCCTTGGTTA AAAGAAACCT ACGACAACTG TGAGATCATC
GCCTTTTGCG CTGACGTAGG TCAGGGTGAA GAAGAGTTAG TGGGTCTGAC TGAAAAGGCA
TTAGCTTCTG GCGCATCGGA ATGTCATATC GTCGATCTGA AAGAAGAATT CGTTAAAGAT
TACATCTACC CAACCATGGC AACGGGTGCG ATCTACGAAG GTACTTACTT GTTAGGTACT
TCAATGGCGC GTCCAATCAT TGCTAAGGCG CAGGTTGAAG TGGCACGTAA AGTGGGCGCC
GATGCCCTGT GCCACGGTTG TACCGGTAAG GGTAATGACC AAGTGCGTTT TGAAGGTTGC
TTTGCGGCAT TAGCGCCTGA TTTAAAAGTG ATTGCACCAT GGCGTGAATG GACCATGCAG
AGCCGTGAAG ATCTGCTGGC TTACTTAGCT GAGCGTAATA TCAAGACGTC GGCTTCTGCG
ACTAAGATCT ACAGCCGTGA TGCCAACGCA TTCCACATTT CCCACGAAGG TGGCGAGTTG
GAAGATCCAT GGAACGAGCC AAGCAAAGGT GTGTGGACGC TGACTGCCGA TCCAGAGGAT
GCGCCAAACC AAGCAGAATA TGTGTCACTC GAAGTTGAAC ATGGTCGTGT GACTAAAGTA
AACGGTGAAG CATTAACCCC TTACGCTGCA CTGATGAAGC TGAACGCCAT CGCTGCACCA
CATGGCGTGG GTCGTATCGA TATCACCGAA AACCGTTTAG TGGGCATGAA GTCTCGTGGT
TGTTACGAAA CTCCAGGCGG CACAGTGATG TTTGCTGCGC TGCGCGCGAT TGAAGAGTTA
GTACTGGATA AAACCAGCCG TACTTGGCGC GAGCAAGTGG GCGCCCAAAT GGCACACTTA
GTGTACGACG GTCGTTGGTT TACACCTCTG TGTAAGTCGC TGCTGGCGGC ATCTGAGTCA
TTAGCCGAGT CTGTTAACGG TGAAGTTGTG GTTAAACTCT ACAAAGGTCA CGCGATTGCC
GTTAAGAAGC GTTCGCCAAA CAGCTTGTAT TCTGAAGCGT TTGCGACCTT CGGTGAAGAC
CAAGTGTACG ACCAAAAACA CGCTGAAGGC TTTATCCGTC TGTACTCGTT AGCGAGCCGT
ATCCGCGCGC TCAACGCTAA GTAA
 
Protein sequence
MSIENKNTGV KKVVLAYSGG LDTSAIIPWL KETYDNCEII AFCADVGQGE EELVGLTEKA 
LASGASECHI VDLKEEFVKD YIYPTMATGA IYEGTYLLGT SMARPIIAKA QVEVARKVGA
DALCHGCTGK GNDQVRFEGC FAALAPDLKV IAPWREWTMQ SREDLLAYLA ERNIKTSASA
TKIYSRDANA FHISHEGGEL EDPWNEPSKG VWTLTADPED APNQAEYVSL EVEHGRVTKV
NGEALTPYAA LMKLNAIAAP HGVGRIDITE NRLVGMKSRG CYETPGGTVM FAALRAIEEL
VLDKTSRTWR EQVGAQMAHL VYDGRWFTPL CKSLLAASES LAESVNGEVV VKLYKGHAIA
VKKRSPNSLY SEAFATFGED QVYDQKHAEG FIRLYSLASR IRALNAK