| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0233 |
|---|
| Symbol | |
|---|
| ID | 4256063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 254400 |
|---|
| End bp | 255677 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638120840 |
|---|
| Product | competence/damage-inducible protein CinA |
|---|
| Protein accession | YP_736295 |
|---|
| Protein GI | 114045745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1058] Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
[COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain
[TIGR00199] competence/damage-inducible protein CinA C-terminal domain
[TIGR00200] competence/damage-inducible protein CinA N-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.43378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAAGT TAGAGATGAT TTGCACTGGG GAAGAGGTGC TGTCGGGTCA GATTGTTGAT
ACTAACGCGG CCTGGTTTGC CAGCACTATG ATGGAGCATG GCATTGAGAT CCAACGGCGA
GTGACTGTGG GGGATCGCCT CGAGGACTTA ATTGCGGTTT TCCAAGAGCG TAGCTTGCAT
GCCGATGTCA TCTTAGTGAA TGGCGGCTTG GGGCCGACCA GTGATGATAT GTCTGCCGAA
GCAATGGCTA AGGCTAAGGG AGAGTCTCTG GTTGAGAATC GCGAGTGGCG TCAGCACTTA
GAAGATTGGT TTACGCGTAA TAACCGTGAG ATGCCCGTCA GTAATTTGAA GCAGGCGATG
CTGCCTGAAT CTGCGGTAAT GGTGGATAAC CCCGTCGGTA CGGCCTGTGG ATTTAGAGTG
AAGTTGAATC GAGCCTGGTT ATTCTTCACC CCAGGTGTGC CATTTGAACT CAAGCATATG
GTGAAGGAAC AATTTATTCC TTTTATCCGT GAAGAGTTTG ACCTCGATGC TAAGGTGGCG
CTGAAGAAGT TGCTCACCAT AGGTCATGGC GAGTCTTCCC TTGCCGACAA AATCGAGCCA
TTGGAGTTGC CTGAGGGGAT TACCATTGGT TATCGCTCCT CAATGCCACA TATTGAGATT
AAGATCTTTG CCCGCGGTGA GAAGGCGATT GCTTTGCTGC CACGGGTGAC TGGGCACATC
AAAATGGTGC TGGGTACTGC GGTTGTCGCC GAAGATAAAG CGACGCTTGC CGAGGAAATC
CATGCGAAGT TACTGAATTC TGGCTTGACC TTGAGTGTTG CCGAGTCTTG CACGGGTGGG
ATGATTACTA GTCAGTTAGT GGATTTCCCG GGCAGTTCTT CCTATTTGCA ACACGGTCTG
GTGACTTACA GTAACGAGTC TAAGGTGCGA GTGTTAGGTG TTAATCCGGC GACGTTAGAC
GATCACGGCG CAGTGTCTAT TCCCACGGTC GAAGAAATGG CTAAGGGCGC GCGTGCTATC
TTAGACAGTG ATTTTGCCTT AGCGACCAGT GGAATAGCGG GACCAGATGG CGGAACCGAA
GAAAAGCCCG TCGGTACGGT AGCAATTGCC TTGGCAACCC GCAGTGGCGT CTACAGCCAA
ATGATAAAAC TGCCGCGACG TTCACGGGAT TTAGTGCGTA GCTTAAGTGC GGCAGTTGCC
TACGATATGT TAAGACGTGA ATTACTCACA GAAGCTGTGA TTGTGGATTA TCAATCGATA
GGGCGTTTCA GCAAGTAG
|
|---|
| Protein sequence | MMKLEMICTG EEVLSGQIVD TNAAWFASTM MEHGIEIQRR VTVGDRLEDL IAVFQERSLH
ADVILVNGGL GPTSDDMSAE AMAKAKGESL VENREWRQHL EDWFTRNNRE MPVSNLKQAM
LPESAVMVDN PVGTACGFRV KLNRAWLFFT PGVPFELKHM VKEQFIPFIR EEFDLDAKVA
LKKLLTIGHG ESSLADKIEP LELPEGITIG YRSSMPHIEI KIFARGEKAI ALLPRVTGHI
KMVLGTAVVA EDKATLAEEI HAKLLNSGLT LSVAESCTGG MITSQLVDFP GSSSYLQHGL
VTYSNESKVR VLGVNPATLD DHGAVSIPTV EEMAKGARAI LDSDFALATS GIAGPDGGTE
EKPVGTVAIA LATRSGVYSQ MIKLPRRSRD LVRSLSAAVA YDMLRRELLT EAVIVDYQSI
GRFSK
|
|---|
| |