| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0232 |
|---|
| Symbol | |
|---|
| ID | 4256062 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 247999 |
|---|
| End bp | 248580 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638120836 |
|---|
| Product | redoxin domain-containing protein |
|---|
| Protein accession | YP_736294 |
|---|
| Protein GI | 114045744 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000057561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0469952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCAT TTGCCTTAGC TGCAATCCTG GCGAGTCTGT CTGTTGCCTT TGCTGGTGGT
GCCCAAGCGT ACCCTGGCAT GCAGCAGGCA AATAAGCCGA TAGAGTCGAC AGTCGATCTG
ATTAACGTTT TGCCAAAAAC TTATCCTATC GAACCCGTTG CTTTTAGTGA CGTCGATGGC
AAGCCGCTCG ATTTCAGTCA ATATAAAGGC AAAATCGTGA TGGTGAACAT GTGGGCGACT
TGGTGTCCTC CCTGTGTCAG AGAGTTACCT GCGATTGAAC GATTGGCGAC AAAGTTTAAA
GCGGAAGAGT TTGCACTATT ACCTATCTCT ATCGATGCGG ATGGCAAACA GCAGGTTCAG
CCGTTTTTAA CTTCATTAGG AATGGCGAAC TTTAACTCCT ACTACGATCC TGAACAAAAC
CTCGGACAAG TGTTTCCATT AGATACTATC CCCGCGACCT TTATTCTCGA TCAAAACGGC
CAATTGATCG CATTTGTGCG ATCATTTGTC GACTGGGATG ACGCAAAAGC CGTATCACTG
ATCCAAGGTT TTATCGATAA AGGCGCGAAA AAGCTGAATT AA
|
|---|
| Protein sequence | MKSFALAAIL ASLSVAFAGG AQAYPGMQQA NKPIESTVDL INVLPKTYPI EPVAFSDVDG
KPLDFSQYKG KIVMVNMWAT WCPPCVRELP AIERLATKFK AEEFALLPIS IDADGKQQVQ
PFLTSLGMAN FNSYYDPEQN LGQVFPLDTI PATFILDQNG QLIAFVRSFV DWDDAKAVSL
IQGFIDKGAK KLN
|
|---|
| |