Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0223 |
Symbol | |
ID | 4255684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 240323 |
End bp | 240523 |
Gene Length | 201 bp |
Protein Length | 66 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638120827 |
Product | Heme exporter protein D (CcmD) |
Protein accession | YP_736285 |
Protein GI | 114045735 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3114] Heme exporter protein D |
TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00474727 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAATTCG ATTCTATCAG TGATTTTTTT AACATGGGTG GCTATGCCTT TTATGTGTGG CTTGCCTATG GCGTGACCTT CTTCTGTTTA TCGACGCTGA TCATCACCAG CGCACGCCAA AAGCGCAAAG TGCTAATTGA AATAGCGAAG AAGATGAACC GCGAAGAGCG CCTCAAAGAA ACTAGGAGTA CCAAATCGTG A
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Protein sequence | MQFDSISDFF NMGGYAFYVW LAYGVTFFCL STLIITSARQ KRKVLIEIAK KMNREERLKE TRSTKS
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