Gene Shewmr7_0217 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0217 
Symbol 
ID4255679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp236165 
End bp236557 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content48% 
IMG OID638120822 
Product30S ribosomal protein S11 
Protein accessionYP_736280 
Protein GI114045730 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0100] Ribosomal protein S11 
TIGRFAM ID[TIGR03632] 30S ribosomal protein S11 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000580806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00573009 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAAG TTCCGTCACG TTCTCCGCGT AAGCGCGTAC GTAAACAGGT TGCAGATGGC 
ATGGCTCATA TCCATGCTTC TTTCAACAAC ACAATTGTCA CCATTACAGA TCGTCAAGGT
AATGCGTTGT CATGGGCTAC TTCAGGTGGT TCAGGTTTCC GTGGTTCACG TAAATCTACT
CCATTTGCTG CACAGGTAGC TGCTGAGCGT GCAGGTGCTG CTGCTCAAGA CTACGGTTTA
AAAAACCTTG AAGTGTTTGT GAAGGGTCCA GGTCCAGGTC GTGAATCAGC CATTCGTGCG
CTGAACGCTG TTGGTTACAA AATTACCAAC ATTACCGATG TGACGCCGAT CCCTCATAAT
GGTTGTCGTC CTCCTAAAAA GCGTCGTGTA TAA
 
Protein sequence
MAKVPSRSPR KRVRKQVADG MAHIHASFNN TIVTITDRQG NALSWATSGG SGFRGSRKST 
PFAAQVAAER AGAAAQDYGL KNLEVFVKGP GPGRESAIRA LNAVGYKITN ITDVTPIPHN
GCRPPKKRRV