| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0189 |
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| Symbol | rpsL |
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| ID | 4257382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 220347 |
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| End bp | 220721 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638120794 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_736252 |
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| Protein GI | 114045702 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.019095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000333311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGGCAACTG TAAACCAGTT GGTACGTAAG CCACGCGCGC CAAAAGTCGA CAAGACTAAT
GTGCCTGCGT TGAATGCGTG CCCACAAAAG CGTGGTGTTT GTACACGTGT GTACACTACT
ACCCCTAAAA AACCTAACTC TGCACTACGT AAAGTAGCTC GTGTGCGTCT GACTAACGGT
TTCGAAGTAA CTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CAGCGTGATT
TTGATCCGTG GTGGTCGTGT TAAAGACTTA CCAGGTGTTC GCTACCACAC TGTTCGTGGC
GCATTAGACT GTGCAGGCGT GACTTCACGT CGCCAAAGCC GTTCTAAGTA CGGTGCTAAG
CGTCCTAAGT CTTAA
|
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| Protein sequence | MATVNQLVRK PRAPKVDKTN VPALNACPQK RGVCTRVYTT TPKKPNSALR KVARVRLTNG
FEVTSYIGGE GHNLQEHSVI LIRGGRVKDL PGVRYHTVRG ALDCAGVTSR RQSRSKYGAK
RPKS
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