Gene Shewmr7_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0176 
SymbolmurB 
ID4257369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp203066 
End bp204121 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content48% 
IMG OID638120777 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_736239 
Protein GI114045689 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0109864 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTT TGTCGCGGCA GAACATCACC ATGTCTTTTC CATATTCGCT AAAGCCGTTT 
AATACTTTTG GCGTGGAGCA ATCTTGCTTA TCCATGATTG AAGTCCATTC CAAGGCAGAG
CTGCAATCGA CCTGCTTATC CTTATATCAG TCTAAGCGAC CTATGCTTGT CCTCGGTGGC
GGCAGCAATA TCGTATTCAC CGATGATTTT AATGGCACTG TAGTGCGTGT GTTGACTAAG
GGGATTTCCT GCTCTGAAGA TGGCACTCAC TTTTACCTTG CCGTTGAGGC GGGTGAGAAC
TGGCATGAAT TAGTTCAGTT CAGCTTAAAT CAGAACATGC CAGGTCTTGA GAACTTAGCG
CTTATCCCTG GTACCGTTGG TGCTGCACCG ATCCAAAACA TTGGCGCCTA TGGCGTAGAG
CTTTGCGATA TTTGTGATTG GGTCGAATAT CTGGATCTCG AGTCTGGTAA CTTGCTAAGG
CTTACTACAG ATGAGTGTGA GTTTGCCTAT CGGGAGTCGA TATTTAAAGG CAGCTTACGC
GACAAAGCTG TGATTACCGC CGTTGGTCTG CGCCTCCCTA AAGCTTGGCA CCCGAAATTG
GCCTATGGTC CGTTACAATC ATTTAACGCT GAGACGGTGA CCTCAAGGGA GATTTTTGAC
CGTGTCTGTG AGGTGAGGAG CGAAAAGCTA CCCAACCCAG AAGAACTCGG TAATGCAGGT
AGTTTCTTTA AGAATCCTAT CGTAAGCGCG GCGACTTATA TGCAGCTTGC TGCGCATTTC
CCGAGTATCG TCGGTTATGC GCAACCCAAT GGAGAGGTTA AACTGGCTGC AGGTTGGCTA
ATCGAACATG CGGGTCTTAA GGGTTTTGCT CTTGGTAACG CGGGAGTGCA TGCGAAGCAA
GCCTTAGTAT TAGTCAATTT AGGTCATGCG ACCGGCCAAG ATATTTGTCG ATTAGCATTA
CATGTTATTG CGCGAGTGAA TGAGGTTTTT GGCGTTAAGC TAGAAGCCGA GCCAAGAATT
ATGGGATTAA CAGGGGAGAC GAGTCTCGAT GTCTGA
 
Protein sequence
MSLLSRQNIT MSFPYSLKPF NTFGVEQSCL SMIEVHSKAE LQSTCLSLYQ SKRPMLVLGG 
GSNIVFTDDF NGTVVRVLTK GISCSEDGTH FYLAVEAGEN WHELVQFSLN QNMPGLENLA
LIPGTVGAAP IQNIGAYGVE LCDICDWVEY LDLESGNLLR LTTDECEFAY RESIFKGSLR
DKAVITAVGL RLPKAWHPKL AYGPLQSFNA ETVTSREIFD RVCEVRSEKL PNPEELGNAG
SFFKNPIVSA ATYMQLAAHF PSIVGYAQPN GEVKLAAGWL IEHAGLKGFA LGNAGVHAKQ
ALVLVNLGHA TGQDICRLAL HVIARVNEVF GVKLEAEPRI MGLTGETSLD V