| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0159 |
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| Symbol | |
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| ID | 4257547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 181367 |
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| End bp | 182554 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120755 |
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| Product | general secretion pathway protein L |
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| Protein accession | YP_736222 |
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| Protein GI | 114045672 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3297] Type II secretory pathway, component PulL |
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| TIGRFAM ID | [TIGR01709] general secretion pathway protein L |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAAC GGCTATTTAT TCGCTTAGGC AGAACCGCAG AGCAGGCATG CTCTTGGCTG
GTTTGGTCCG AACAAGAACA AGAAATTATC GCCTCTGGTG AACTTGCCAA CGCCCAAGGT
TTATCAACCT TAACCGAGCG CGCGGGAAAT CGGCCTATCG ATGTATTGGT GCCAGCCTCC
GCCATGACGC TCACCAGCGT GAATCTGCCC GAAAAAGGCC AACGCCAAGC CTTAAAAGCC
CTGCCTTTTA TGCTGGAAGA AACCATCGCC GATGATGTGG ATGCGATGCA CTTTACCGTT
GGTCCACGCA ATGGCGATGC TCTCAGTGTG GTAGCCGTTG CCCATGAGCA AATGCAAACT
TGGCTCAGTT GTTTGGCTGA AGCGGGTTTA AAAGTGAAGC GTATCGTGCC CGATTGCCTC
GCCTTGCCAT TACAGGAATG CCAATGGGCG GCAATGCGTT TCGGTAACGA GTTATTACTG
CGTACAGGAT TAGGAACCGG CCACAGCCTG CCTTTACCTT GGCTGCCTGT CGCGATGAAG
CAACTGACGG CACAGGCCGA CGAAGTGTCG GTCGCCAGTT ACACTGAGAT GGAACTGGAC
GGCGTTGAGC TTAAGCCACA GCCGCTCGAT TTACCTATGT TGGTGCTAGC GCGCGGTATT
TTACATGCGC CCATCAACTT ACTCACGGGT GTGTATACGC CGAAGCGCGA ATACAGTAAG
CATCTGTTGC AATGGAAAAA TGCCGCAATC GTGTTAGGTG TTGCCATTGT CTTGTCCTTA
GTCAATAAGG GCTTAACCAT TCATCAGGTG AATGGCCAGA TTGCCGATTT GAAGGCGCAG
AGCGAAGCCA TTTATCAACA AGTGGTGCCG GGGAACTCAC GCATTGTGAA TTTACGTTCG
CAAATGGAAA GCCAACTGCG TTCACTCCAA GGTCAAGGCA GTGGTGCTGA GTTTTTTGCG
ATGCTCGATG GTTTGCAGGA CGCCTTTAAA CAAGTGCCCG AGCTGAAACC AAACACCCTA
AGATTTGAGA GCGCCCGTAA TGAAATCCGT ATGCAAGTTA CGGCCAAGAA TTACGCGCAA
ATTGAGAAGT TTAAAGAGAT TGTCGGCCGT CGTTTCCAAA TGGATGGCGG TACGATGAAC
AGCGGTGAAG ATCAGGTCAC CAGTACCTTA ACCTTGAGGA GCAAATAA
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| Protein sequence | MSERLFIRLG RTAEQACSWL VWSEQEQEII ASGELANAQG LSTLTERAGN RPIDVLVPAS
AMTLTSVNLP EKGQRQALKA LPFMLEETIA DDVDAMHFTV GPRNGDALSV VAVAHEQMQT
WLSCLAEAGL KVKRIVPDCL ALPLQECQWA AMRFGNELLL RTGLGTGHSL PLPWLPVAMK
QLTAQADEVS VASYTEMELD GVELKPQPLD LPMLVLARGI LHAPINLLTG VYTPKREYSK
HLLQWKNAAI VLGVAIVLSL VNKGLTIHQV NGQIADLKAQ SEAIYQQVVP GNSRIVNLRS
QMESQLRSLQ GQGSGAEFFA MLDGLQDAFK QVPELKPNTL RFESARNEIR MQVTAKNYAQ
IEKFKEIVGR RFQMDGGTMN SGEDQVTSTL TLRSK
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