| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0157 |
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| Symbol | |
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| ID | 4257073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 179562 |
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| End bp | 180323 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120753 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_736220 |
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| Protein GI | 114045670 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTTAA AACAAACTAA TGCTCAAAAG GGTTTTACCC TGCTGGAAAT GCTGATCGCG
ATTGCGATTT TTGCCATGTT GGGGTTAGCC GCCAATGCGG TACTCAGCAC AGTGCTGACC
AATGACGAAG TGACAAAAAA CTTCTCGGTG CGTTTAAAGG CACTGCAACA GGGTTTTGGC
GCCATTGAGC GCGACTTGGG GCAGATGGTT GCCCGCACAC CCAGATTACT CGAAGGCGGC
CGTGGCACCA CAGTCTTCCA AACGGGTAAC GATATTTTAG ATTCGGAATC AGAGGCCTTA
GTCTTCTACC GTTTAGGCTG GCTCAACCCC GACGGCATAT TGCCCCGTGG CAGCATACAG
TCAGTTGCCT ACGTAGTGCG CGAAGGAAGA TTAGAGCGTT GGTACTTTCC GTATCCCGAA
CCCGAATTTG GCGCCGAACC AATGAAGACT GTGATTATCG ATAAGGTGCT CTCGGTCGAG
TATTCCTTCT TTATGGAGGA CAAATGGGAG CGTAAGGTCG AAGCGACCAA GTTACCCAAA
GCCATCGCCA TGGAAATTGA GATTGAAGGC TTAGGCAAAA TTCAACGTAA GTTTATGTTG
CCCTTGGGCG CGGCGGCGCC AGAGAAGTCC AATGAAGAGG ACAACAAGAA CGACAACGCC
GATGACAATA AAGACGATAA CGGCGACCAA GACAATAATG GTGATGGCTC GGGTAATGGT
GATCCCGATA AGGGCGACCC AGACAATGAG GATGGCGCAT GA
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| Protein sequence | MSLKQTNAQK GFTLLEMLIA IAIFAMLGLA ANAVLSTVLT NDEVTKNFSV RLKALQQGFG
AIERDLGQMV ARTPRLLEGG RGTTVFQTGN DILDSESEAL VFYRLGWLNP DGILPRGSIQ
SVAYVVREGR LERWYFPYPE PEFGAEPMKT VIIDKVLSVE YSFFMEDKWE RKVEATKLPK
AIAMEIEIEG LGKIQRKFML PLGAAAPEKS NEEDNKNDNA DDNKDDNGDQ DNNGDGSGNG
DPDKGDPDNE DGA
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