Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0141 |
Symbol | |
ID | 4257057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 159972 |
End bp | 161090 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120737 |
Product | hypothetical protein |
Protein accession | YP_736204 |
Protein GI | 114045654 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGTAT TTGCCCCTGC AAGCCCTTTT GCCGACTTTA TCTATCGTCA TTTCCGTGCC ATTCACGCCC TTAAACTCGG CCTCGCCCTG CTGATTGCCG TCACCATTAA CGCCATTTGG TCGCCGCCGC ATTTTATTTG GAGCATGGTG ACCATAGTGA TCATTATGAT GAGTCTGCCG CAGGTGGGCG GCGCAATTGA AAAGTCCCTG CAACGGGCGG TAGGCACCTG TTTAGGGTCG GCTTATGGCG TGATGTTAGT GGCCACTATC GACAGTTATT GGCTGATTAT GGGGCTGCTG ATCTTAGGGG TCACGCTGAT CTGTTTTATC TCGGCGGGGC GCTACAGCTA TGCCTATCTG GTGGCGGGAT TTACCATTAT TATCGTGGTG GGCGATGCGA ACCACGACAC TTCAGAGGCG CTCTGGCGCA CGGCGAATAT TCTGCTCGGT TGTGTTATCG CCATTCTGGT GTCGCTGTTT ATCTTCCCGA TTAAGGCCAA GCAAGACTGG CGCAGCCAGC TCGCCAATGC CATCGACAGT ATGGCCAAAG TGCTTACCCA ACATTTACAG GCTCCCGCCA ACCATGATTT AGATTTCCGC GCCGAACTCG AGGCGGCCAT GAAGGCGGTA TTAACCCAGA AGAAACTGTT TTTCTCCCTC GAGTGGGAAA GCCAAACCCT GAAAAAACAT AAAGTGCTGC TGGCAGAATT AGTTAATAAA CAGGTGCGGC TGATCACCCT ACTCGAGTTA TTACCTTTGA GTCGCTGGCA GGAGGCCGAC AAAGAGGCAT ACCACCAAAT CAACCGTGTC GCCGCCGAGC TTACTGCGTA TCTTCACAGG CTGAGTGAGT TTGTTGCAGG CAAAACAGCC ACATTGCCCA CACTACCAAA TTCATTAGAG CAAGAGTTGC AGCACAGATT ACAACTCAGC TTGGCCGCCC AAACGCCAAA TTCGGCCCCT TTAGCCAATG AAGTCGCGCA GGGATTTGCC CTCACGGGAT ACGGCTGGCT TATCTATCAA CTCGCCATTG CCGTCGAAGC GCTCTACGCC GATATCGAGA TTATCGAAAT CGCCTATAGC GGACAAACCG TGTTACATAA AACCGCCAAA CCTTCATAG
|
Protein sequence | MSVFAPASPF ADFIYRHFRA IHALKLGLAL LIAVTINAIW SPPHFIWSMV TIVIIMMSLP QVGGAIEKSL QRAVGTCLGS AYGVMLVATI DSYWLIMGLL ILGVTLICFI SAGRYSYAYL VAGFTIIIVV GDANHDTSEA LWRTANILLG CVIAILVSLF IFPIKAKQDW RSQLANAIDS MAKVLTQHLQ APANHDLDFR AELEAAMKAV LTQKKLFFSL EWESQTLKKH KVLLAELVNK QVRLITLLEL LPLSRWQEAD KEAYHQINRV AAELTAYLHR LSEFVAGKTA TLPTLPNSLE QELQHRLQLS LAAQTPNSAP LANEVAQGFA LTGYGWLIYQ LAIAVEALYA DIEIIEIAYS GQTVLHKTAK PS
|
| |