Gene Shewmr7_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0141 
Symbol 
ID4257057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp159972 
End bp161090 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content52% 
IMG OID638120737 
Producthypothetical protein 
Protein accessionYP_736204 
Protein GI114045654 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTAT TTGCCCCTGC AAGCCCTTTT GCCGACTTTA TCTATCGTCA TTTCCGTGCC 
ATTCACGCCC TTAAACTCGG CCTCGCCCTG CTGATTGCCG TCACCATTAA CGCCATTTGG
TCGCCGCCGC ATTTTATTTG GAGCATGGTG ACCATAGTGA TCATTATGAT GAGTCTGCCG
CAGGTGGGCG GCGCAATTGA AAAGTCCCTG CAACGGGCGG TAGGCACCTG TTTAGGGTCG
GCTTATGGCG TGATGTTAGT GGCCACTATC GACAGTTATT GGCTGATTAT GGGGCTGCTG
ATCTTAGGGG TCACGCTGAT CTGTTTTATC TCGGCGGGGC GCTACAGCTA TGCCTATCTG
GTGGCGGGAT TTACCATTAT TATCGTGGTG GGCGATGCGA ACCACGACAC TTCAGAGGCG
CTCTGGCGCA CGGCGAATAT TCTGCTCGGT TGTGTTATCG CCATTCTGGT GTCGCTGTTT
ATCTTCCCGA TTAAGGCCAA GCAAGACTGG CGCAGCCAGC TCGCCAATGC CATCGACAGT
ATGGCCAAAG TGCTTACCCA ACATTTACAG GCTCCCGCCA ACCATGATTT AGATTTCCGC
GCCGAACTCG AGGCGGCCAT GAAGGCGGTA TTAACCCAGA AGAAACTGTT TTTCTCCCTC
GAGTGGGAAA GCCAAACCCT GAAAAAACAT AAAGTGCTGC TGGCAGAATT AGTTAATAAA
CAGGTGCGGC TGATCACCCT ACTCGAGTTA TTACCTTTGA GTCGCTGGCA GGAGGCCGAC
AAAGAGGCAT ACCACCAAAT CAACCGTGTC GCCGCCGAGC TTACTGCGTA TCTTCACAGG
CTGAGTGAGT TTGTTGCAGG CAAAACAGCC ACATTGCCCA CACTACCAAA TTCATTAGAG
CAAGAGTTGC AGCACAGATT ACAACTCAGC TTGGCCGCCC AAACGCCAAA TTCGGCCCCT
TTAGCCAATG AAGTCGCGCA GGGATTTGCC CTCACGGGAT ACGGCTGGCT TATCTATCAA
CTCGCCATTG CCGTCGAAGC GCTCTACGCC GATATCGAGA TTATCGAAAT CGCCTATAGC
GGACAAACCG TGTTACATAA AACCGCCAAA CCTTCATAG
 
Protein sequence
MSVFAPASPF ADFIYRHFRA IHALKLGLAL LIAVTINAIW SPPHFIWSMV TIVIIMMSLP 
QVGGAIEKSL QRAVGTCLGS AYGVMLVATI DSYWLIMGLL ILGVTLICFI SAGRYSYAYL
VAGFTIIIVV GDANHDTSEA LWRTANILLG CVIAILVSLF IFPIKAKQDW RSQLANAIDS
MAKVLTQHLQ APANHDLDFR AELEAAMKAV LTQKKLFFSL EWESQTLKKH KVLLAELVNK
QVRLITLLEL LPLSRWQEAD KEAYHQINRV AAELTAYLHR LSEFVAGKTA TLPTLPNSLE
QELQHRLQLS LAAQTPNSAP LANEVAQGFA LTGYGWLIYQ LAIAVEALYA DIEIIEIAYS
GQTVLHKTAK PS