Gene Shewmr7_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0140 
Symbol 
ID4257038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp157843 
End bp159840 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content54% 
IMG OID638120736 
Productpeptidase M14, carboxypeptidase A 
Protein accessionYP_736203 
Protein GI114045653 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2866] Predicted carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGT TTTCCCCTTC CGTTATCGCC ATTGCCTGCT TATCGGCGGG TTCACTATTC 
ACCGCCCAGT TAGCCGTTGC CGCGAATACC GAAGTCGCGC AACCCGAAGT GACAACGACT
GGAGCTGCCA ACGCTGAAGT CGCAAACACT GAGGCAGCTA AAACCGACGC GGTTGACGCC
AGTGCCGACA GCAGCGCTTC GCCCGCGGCA GAAGCCACTC CCGCAGCCGC AGTGGCAGCG
ACACCGACTC GCGCCAATAC CTTTGTGAAT GACGCCATCC TACCGCCAAG CATCACTTGG
CATGGTGCCA GTGAGTCATT GTTACTCAGC GCCGATAACG AATGGGCGAC GCCCTTCGAG
CAAAGCAACG GCAACGAAAG CCCAAGCTAT GAAGATACCA TTACTTGGCT CGACCGATTG
GCGGCCGAAA CCACCAAATT GCAGAAAGTC AGCCTAGGCA AGAGCCCTCA AGGGCGCGAC
ATTTGGATGT ATGTCGCCAG CAGCGAAGGC ATTAACGAAT CGGCACGGCT AAAGCAAAAC
ACTAAGCCGA CGATTCTGGT GCAGGCCGGG ATCCACGCGG GCGAAATCGA CGGTAAAGAT
GCCGGCATGA TGCTGCTGCG GGATATCATC AAAGGCGACA AGAGCGACTT GGTCGAAAAG
GCTAACCTAC TGTTTGTGCC TATGTTTAGC GTCGATGCCC ATGAGCGCAG CGGCGAATTT
AACCGCGTAA ATCAACGCGG CCCAGTCAAT ATGGGTTGGC GCACCAATGC CAATAACCTC
AACCTGAACC GCGACTACGC CAAGGCCGAC ACCTTAGAAA TGCAGCATAT GCTGCGGGCA
ATCAACGTGT GGCAACCGGA TCTGTATATC GATGTGCATG TCACCGACGG TATCGACTAC
CAGTACGACA TCACCTTCGG CTACAACCTC GCCCAAGGCT TGAGCCCCGC CAGTTTCCGC
TGGCTCGAAA ATAGCTACCG CCCAGCGGTC GAAGCGGCCT TAACCGCCCA AGGCCATATC
CCAGGTCCGC TGATTTTTGC CGTCGACAAT ACCTACATCA CTAAAGGCAT GTCACTGTGG
AACCCTAGCC CACGCTTTTC TAATGGTTAT GGTGATGCCC GCCATCTGCC CACCATTTTG
ATTGAGAACC ACAGCTTAAA ACCCTTTAAG CAGCGCGTAC TTGGCACCTA TGTGATGCTA
GAGCAAACCC TGAAAACCGT TGGCGACCAA GCGACCAAGT TAAAGAGTGC GATTCAAGAG
GATAAATACC GCGCCTCGCC ACTGATCACG TTAACGTGGA AATCGGCGCC ACTGGCTAAA
GGCTGGGATT TTAAAGGTAT AGATTACAAG CTTGAGCAAA GCCCGATTAG CGGCACCGAG
GTAGTGCGTT GGACAGGCGA GCCTAAGCTG TACCCGAACC TACCTGTGAT TGCCGAAACC
GTGCCCGACA TAAAAGTCAC TCGCCCGAGT GCTTACTATA TTCCCGCCCA GTGGACACAA
GTGATCGACC GCTTAAATCT ACACGGCATT CGGATGACGC GTTTAAGCAA GCCAACAGAG
CTTAAATTGC AGCAATACAG CTTGAGCAAT CCGGTGTTTA ATACCAAAGC GTTCGAGGGG
CGACTCACAG TGAAGGCCGA CTCGACACTG GCCAAACTGA CCACCACCTT GCCCGCGGGC
ACAGTGAAAA TCAGCACAGA TCAACCCTTA GGCGATCTGG CGATTTTACT GCTTGAGCCA
CAATCACCGG ACTCGTTGCT GCAATGGGGC TTCTTTAACC CTATCTTTAC CCGTACCGAA
TACATTGAGG ACTACGCCGT AGAGCCGCTG GCCGCCAAGA TGCTTAAGGA AGATCCCAAG
CTGCAGGCGG AATTTAACAA AGCACTGGAA AACCCAGAGT TTGCCGCCGA TCCCGAGGCA
CGCTTACGCT GGTTCTATGA GCGCAGCCCT TACTACGATA ATCAATATCT TAAGTATCCG
GTCTACCGTA GCCGTTAA
 
Protein sequence
MRLFSPSVIA IACLSAGSLF TAQLAVAANT EVAQPEVTTT GAANAEVANT EAAKTDAVDA 
SADSSASPAA EATPAAAVAA TPTRANTFVN DAILPPSITW HGASESLLLS ADNEWATPFE
QSNGNESPSY EDTITWLDRL AAETTKLQKV SLGKSPQGRD IWMYVASSEG INESARLKQN
TKPTILVQAG IHAGEIDGKD AGMMLLRDII KGDKSDLVEK ANLLFVPMFS VDAHERSGEF
NRVNQRGPVN MGWRTNANNL NLNRDYAKAD TLEMQHMLRA INVWQPDLYI DVHVTDGIDY
QYDITFGYNL AQGLSPASFR WLENSYRPAV EAALTAQGHI PGPLIFAVDN TYITKGMSLW
NPSPRFSNGY GDARHLPTIL IENHSLKPFK QRVLGTYVML EQTLKTVGDQ ATKLKSAIQE
DKYRASPLIT LTWKSAPLAK GWDFKGIDYK LEQSPISGTE VVRWTGEPKL YPNLPVIAET
VPDIKVTRPS AYYIPAQWTQ VIDRLNLHGI RMTRLSKPTE LKLQQYSLSN PVFNTKAFEG
RLTVKADSTL AKLTTTLPAG TVKISTDQPL GDLAILLLEP QSPDSLLQWG FFNPIFTRTE
YIEDYAVEPL AAKMLKEDPK LQAEFNKALE NPEFAADPEA RLRWFYERSP YYDNQYLKYP
VYRSR