Gene Shewmr7_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0138 
Symbol 
ID4257036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp156004 
End bp156780 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content49% 
IMG OID638120734 
Productputative lipoprotein 
Protein accessionYP_736201 
Protein GI114045651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTAC GCCCTTTTAT ATTCACCCTC GGATTTGTCG CCCTCTTTAC GGTTGGCGTG 
TCACTCACTG GCTGCATTAT CAATGTGAAC GCCGCTGGCA TGCCTGATTT AGACCACCAA
CAACGTGAAC TCAGCCTCGA TGCCCAAGAC CTACAGGCGC TCGTCGCCGA AACCGGTGCA
GGCAGCCTTG AAATTATCGG TGTCGAAGGC CTAACCCAAA TTAAGTTAGT CGCTGATATC
TATAGCAATG ACGATAGCAA AGTCATTCTC ACCCTTGAGA AAAAGGCCAA CAAAGCCCAG
CTTAAGGCCG ACTTTGAATC CCATAGCAGC TTTAGCAATT ACTCACCCTA TATCGACCTT
AAGTTACAAG TACCCGCCGG ATTAGCGCTG GACATTGATG ATGGTTCGGG TGCGATTTTG
ATCAACAAGA TGACTGCGGA TATTAAGGTC AAGGATGGCT CGGGCGAACT GGCTATCCAT
GGTGGCAATA ATGTCAGCAT CGACGATGGT TCTGGCGCGA TTGAAGTCAG CCAAGTCAAC
GGCAACCTAG CGATTGTCGA TGGCTCTGGC GGTATCCAAG TTAATGATAT TAAAGGCAGC
ATCACCATCG ATGATGGCTC AGGTGAAATC AACGTCGCCA ATGTGCAAAA CACTGTCACC
ATCAACGATG GCTCAGGCGA TATCAATGTG GTGAACACTA AGGGCTTAAC CATTCTCTCG
GCAGGTTCAG GGGATGTGAG CTTCGATAAA ATCGATGGCC CAGTCAGTAA ACACTAA
 
Protein sequence
MSLRPFIFTL GFVALFTVGV SLTGCIINVN AAGMPDLDHQ QRELSLDAQD LQALVAETGA 
GSLEIIGVEG LTQIKLVADI YSNDDSKVIL TLEKKANKAQ LKADFESHSS FSNYSPYIDL
KLQVPAGLAL DIDDGSGAIL INKMTADIKV KDGSGELAIH GGNNVSIDDG SGAIEVSQVN
GNLAIVDGSG GIQVNDIKGS ITIDDGSGEI NVANVQNTVT INDGSGDINV VNTKGLTILS
AGSGDVSFDK IDGPVSKH