Gene Shewmr7_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0121 
Symbol 
ID4256341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp137909 
End bp138319 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content47% 
IMG OID638120717 
Productflagellar basal body-associated protein FliL-like protein 
Protein accessionYP_736184 
Protein GI114045634 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00123712 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAAAAT TATTATCAGC CTGCCTGATC TTATTCAGTG TTGTATTGAG TGCATATGCG 
GCCGACGAGA AAGAAGCGAC TCCCGCAGGG GATTACGCTT ACTACGGTTT CGAACCCGAA
ATCGTGACTA ACTATATTTC AAACCGCAAG AAGCTGGGGT TTGTGAAGAT CAGTGTCGAG
CTGATGGTAA AAAATCCCGA TGATCTCGTC ATCGTCGAGC GCCACGATCC GCTGCTGCGC
GCCGCGATTA TTGAAGTGCT GGGTAATCAG GCCGAAGAAA AGATTAAGTC CCTCACTGGC
CGTGAAGAAA TCCGCCGTGA GTGCTTCGAT ATGGTGAATA ATCTGCTGAC CAAAGAGGCG
GGTAAACCCT TAGTGGTCAA CCTACTGTTT ACCTCCTATC TTTACGATTA A
 
Protein sequence
MKKLLSACLI LFSVVLSAYA ADEKEATPAG DYAYYGFEPE IVTNYISNRK KLGFVKISVE 
LMVKNPDDLV IVERHDPLLR AAIIEVLGNQ AEEKIKSLTG REEIRRECFD MVNNLLTKEA
GKPLVVNLLF TSYLYD