Gene Shewmr7_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0116 
Symbol 
ID4256336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp130658 
End bp131458 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content52% 
IMG OID638120712 
Producthypothetical protein 
Protein accessionYP_736179 
Protein GI114045629 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.20644 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCATAC TCTTTGTCGC CCTTAATACC CATCCTCAGT ATCCGCTGAT CATTTGCGCC 
AATCGGGATG AGTTTCACCA TAGGCCCACA GCTCCAGCAC AATTTTGGCC ACCGGAAGAA
AACATACTCG CAGGAAAAGA TCTGCAGGCG GGCGGAACTT GGTTTGGGGT GAATAAACAG
GGGCAAATTG CCGGAGTCAC CAACCTTAGG GTGGCTCAAA AATCCCAAGA GCCAATGCGC
AGCCGCGGGG AGCTGATCAT TAAAGCCTTA AGCTCGGGTT CGCTTATCTG CCCTAACTGG
CTTGAGGAAC ACGCCGAAGA TTATCAGCCA TTTAATCTCG TTTTTGGCCA AGGGACGAAT
CTCTACTGCT TTAACAGTCT TAAGCGGAAC ACGGTAAAAC TCACCGCAGG ATTCCATGCC
ATTAGCAATG GCGCACTCGA TGATATCTGG CCGAAAATGG CTAAAGGCCA ACGCTCGCTC
GAGGCCCTTA TCCAACAAGC GGGACCACTC GAGTTAGAGT CGCTCATTCA GTTGATGCAG
GATGATTCGC GGCCACAGGA TAACGAGCTA CCCGACACTG GCGTCGGGCT AGAGTGGGAA
CGCCGACTCG CGGCAATTTA TATTCGTCAC CCCGACTATG GCACCCGCTC CACCAGCATT
TTGCTGCAAA ATGCCCAAGG GGAAGTCCAA TTTACCGAGG TAAGATACGA TGGTAAGGGT
CGACGGCTGG GACAGCAGGA CTTCCACTTC ACCCTGCCGC CACAATTACC TAAAGAACCG
GACTGCCTAG CTCACTTTTA G
 
Protein sequence
MCILFVALNT HPQYPLIICA NRDEFHHRPT APAQFWPPEE NILAGKDLQA GGTWFGVNKQ 
GQIAGVTNLR VAQKSQEPMR SRGELIIKAL SSGSLICPNW LEEHAEDYQP FNLVFGQGTN
LYCFNSLKRN TVKLTAGFHA ISNGALDDIW PKMAKGQRSL EALIQQAGPL ELESLIQLMQ
DDSRPQDNEL PDTGVGLEWE RRLAAIYIRH PDYGTRSTSI LLQNAQGEVQ FTEVRYDGKG
RRLGQQDFHF TLPPQLPKEP DCLAHF