Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0113 |
Symbol | |
ID | 4256333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 128846 |
End bp | 129469 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638120709 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_736176 |
Protein GI | 114045626 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.894147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACCG AAACTTGGTT ACTCTATCTT TTTGCGATTG TTTTGATTGG GATTTCCCCC GGGCCTATCG CCATGTTGTC TATGTCCCAC GGCATTCATT TCGGTAAAAA ACGTAGCATA GCCACAGGGC TTGGCAGTGT CAGCGCCGCG CTGGTGCTGA TGGCCGCTTC GGCGGCAGGA TTAGGCGCCA TTATCAGCGC CTCGGAATAC GGCTTTAGCT TGCTCAAATG GTGCGGCGCC GCCTATCTGG TGTTTTTGGG CATTAAACTC GTGCTCACCA AGTCGCAGGG GCAAAAGCTG GAAGTAGCGA AAACCGAAGG AAAAGGGACA GCGAAACAAC TCTATAAGCA GGCATTTTTA GTAGGGATCA GCAATCCTAA GGACTTACTG TTTTTTGCGG CGTTATTTCC ACAATTTATC GATTTAACCG CACCACAAAT GCCGCAACTG ACGATTCTTG CCCTCACCTG GGCGCTGGTC GATTTTAGCT TTGTAATGCT GTACGCCTCT ATGGCCAATG TGCTGGCCCC GAGCCTAAAG GCCAGCAACA AACTGCATTG GTTTGACCGT ACCAGCGGCG GCGTGTTTCT CACCCTCGCC GCCATCTTAG TCAGTCGGGA TTAG
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Protein sequence | MQTETWLLYL FAIVLIGISP GPIAMLSMSH GIHFGKKRSI ATGLGSVSAA LVLMAASAAG LGAIISASEY GFSLLKWCGA AYLVFLGIKL VLTKSQGQKL EVAKTEGKGT AKQLYKQAFL VGISNPKDLL FFAALFPQFI DLTAPQMPQL TILALTWALV DFSFVMLYAS MANVLAPSLK ASNKLHWFDR TSGGVFLTLA AILVSRD
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