Gene Shewmr7_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0109 
Symbol 
ID4256329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp125039 
End bp126028 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content47% 
IMG OID638120705 
Producthypothetical protein 
Protein accessionYP_736172 
Protein GI114045622 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC GCAACCTCAA TCTTAGCCTT GCCCTCTTGC TCTGTGCTCT CAGCTATCCG 
GCGATTGCCG ATACTGTGTT TCTCACCAAT GGCGATAAAA TCACAGGTGA AATTAAAGCC
CTAGACGAAC AGAATCTGGT GATTAAACCC AGCTACGCCC CCCAAATCAC TATCGAACGC
AGCGCGGTTC GCAGCTTTGA AACCCGTGAG CCACAGCCTT GGAGCATCAA TCGCTCAATC
AAGGAGGTAA CGGTTCAAGT TTCTGAATTA GATAGCTTTG TGCTGATAGA CGATAAGCAA
ACCCCAATCA GCGAGTTAAT CTATTCGGAA CTCTTGAGTG ACTCTGACTG GCGCTACAGC
GGTAGCGTTG AGGCCGCCAT TGATGTCACC CATAACAGTA AAAACACTCA AAAGCTGCAT
GCTAAGGGCG ATGTAACCGC CGAAACCTTA AACTGGCGTC ATAACCTCAA GAGTGAAGTC
CGCTACGAGA CCGAAGATAA AACCACGAAA CGTAATACCC TCGAAGCCCA TTACAGCCTC
GACTATTTGA TCAGTGATCA TTGGTTAGTG CGGCAAGAGG ATTATTATCA GGAGGATAAG
CTCAATCTCG ATATTCGCAG CTACTACGCC GCATTGGGTC CTGGCTATCG TTTCTGGGGC
GTCAACCGCG ACAAGCTCGA CTTTGTGCTT ACTTACAACC ACTTCTGGTT AGATTATCAA
GTATTTACCT ATGAGCTAAA CGCTTGGGCG GCGACCATCA ACTACAAGCA ATATTGGTTC
GACGGCGTGT TAGAAACCTA TGCGGATCTG CAAATCGCCT TCCCCGATAT TCCCACCATT
GAATATATTT CGGACTCCAC ATTTGGGCTT AAATATCTGC TGACACAGCA GATTTACCTC
TCATTCAAAT ACGACATCAA TGAGACTAAA TCGACTGTGC AGCACTCGCG GGATATCTCC
TACACACTAG GTCTGGGAGT CAACTTCTAG
 
Protein sequence
MPKRNLNLSL ALLLCALSYP AIADTVFLTN GDKITGEIKA LDEQNLVIKP SYAPQITIER 
SAVRSFETRE PQPWSINRSI KEVTVQVSEL DSFVLIDDKQ TPISELIYSE LLSDSDWRYS
GSVEAAIDVT HNSKNTQKLH AKGDVTAETL NWRHNLKSEV RYETEDKTTK RNTLEAHYSL
DYLISDHWLV RQEDYYQEDK LNLDIRSYYA ALGPGYRFWG VNRDKLDFVL TYNHFWLDYQ
VFTYELNAWA ATINYKQYWF DGVLETYADL QIAFPDIPTI EYISDSTFGL KYLLTQQIYL
SFKYDINETK STVQHSRDIS YTLGLGVNF