Gene Shewmr7_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0092 
Symbol 
ID4255554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp104334 
End bp105560 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content52% 
IMG OID638120687 
Productimidazolonepropionase 
Protein accessionYP_736155 
Protein GI114045605 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID[TIGR01224] imidazolonepropionase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTGGG ATCAGGTTTG GATAGACGTT AACGTAGCAA CAATGGACCC TTCCATATCA 
GCACCTTACG GCGCAATTAC CAATGCGGCT ATCGCAGTAA AAGACGGTAA AATTGCCTGG
TTAGGCCCAC GCAGCGAGCT GCCCGCCTTC GATGTGTTGT CCATTCCTGT TTACAGGGGC
AAGGGCGGTT GGATCACTCC TGGGCTGATT GATGCCCACA CCCATTTAGT ATTTGCCGGT
AATCGTGCCA ACGAATTCGA GCTACGCCTA AAGGGCGCCA CCTACGAGGA AATCGCCCGT
GCTGGCGGCG GCATTATTTC CACGGTTAAC GCCTGCCGTG AGGCCGACGA AGCCGAGTTA
TTTGATCTCG GTCGCCAGCG TTTAAATGCC TTGGCGAAGG AAGGCGTTAC CACGGTTGAG
ATTAAATCTG GCTACGGTTT AGATACCGAA ACCGAACTCA AAATCCTGCG TGTTGCCCGC
GAACTCGGCC AACATCACCA TGTGGATGTG AAGACCACCT TCCTCGGTGC CCATGCGGTG
CCGCCCGAGT TTAAAGACAA TAGCGACGGC TATGTCGACT TAATCATCAA TAAGATGCTG
CCTGCAGTGA TTGCCGAAAA CCTCGCCGAT GCGGTGGATG TATTCTGTGA AAACATCGCC
TTTAACCTAG AGCAAACCGA GCGCGTACTG AGCGCCGCCA AAGCAGCTGG CCTGCAAGTT
AAACTGCATG CCGAGCAATT ATCCAATATG GGTGGCTCTG AATTAGCCGC ACGTTTAGGG
GCTAAGTCGG TTGATCATAT TGAATATTTA GATGAGGCTG GTGTTAAAGC CCTAAGTGAA
AGTGGCACCT GCGCCGTACT GTTACCGGGC GCGTTTTACT TTTTGCGGGA AACCCAAAAA
CCGCCTATCG ACTTATTGCG TCAATACGGT GTGCCTATGG TGCTCGCCAG CGACTTTAAT
CCCGGCTCAT CACCCATCTG CTCGACCCTG CTGATGCTGA ACATGGGTTG CACCCTATTC
CGCTTAACCC CAGAGGAAGC GCTTGCGGGT TTAACATTGA ATGCCGCCAA GGCACTAGGG
ATTGAAGAGA ATGTCGGCAG CTTAGTGGTT GGTAAGCAGG CGGATTTCTG TCTATGGGAT
ATCGCCACCC CAGCACAACT CGCCTATAGC TACGGCGTGA ATCCCTGCAA GGATGTAGTG
AAAAACGGTA AGTTAGTGCA TCAATAA
 
Protein sequence
MSWDQVWIDV NVATMDPSIS APYGAITNAA IAVKDGKIAW LGPRSELPAF DVLSIPVYRG 
KGGWITPGLI DAHTHLVFAG NRANEFELRL KGATYEEIAR AGGGIISTVN ACREADEAEL
FDLGRQRLNA LAKEGVTTVE IKSGYGLDTE TELKILRVAR ELGQHHHVDV KTTFLGAHAV
PPEFKDNSDG YVDLIINKML PAVIAENLAD AVDVFCENIA FNLEQTERVL SAAKAAGLQV
KLHAEQLSNM GGSELAARLG AKSVDHIEYL DEAGVKALSE SGTCAVLLPG AFYFLRETQK
PPIDLLRQYG VPMVLASDFN PGSSPICSTL LMLNMGCTLF RLTPEEALAG LTLNAAKALG
IEENVGSLVV GKQADFCLWD IATPAQLAYS YGVNPCKDVV KNGKLVHQ