Gene Shewmr7_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0090 
Symbol 
ID4255552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp103052 
End bp103480 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content51% 
IMG OID638120685 
ProductMarR family transcriptional regulator 
Protein accessionYP_736153 
Protein GI114045603 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTA CTTCTCTCGG TGAAACCTTG CACAGGTTAG TGCATGCCTA CAAAAAACAG 
CTGCGTGCGG ATATTGCCGC GCAGCAGATT GAATTGCCTG TCACCCATAT TCGGGCGCTT
AAGGGGATTT GCCGTCATCC CGAGGCGACG GCGCAATCTA TTGCCCTACG CATGCAACGG
GATAAAGCCC AAATTACGCG GGTGCTCAAT GAGCTACAGC AGGCTGGTTA TATCCTAAAA
GTCGATAATC CTAAGGATGG CCGTAGCCAG TTATTGAGAC CGACGGCTCA GGGCGAGCAG
TTGATGACGC AAATTATTGC CGCCGAAAAA GCCACCGTTG CCCATATGAC CCAAGCACTC
GATCAGGATG AAATTGCTGT GTTTATCCGT ATTGCCAACC AGATCAGCGA TAGCGTGGCG
GAAAGCTAA
 
Protein sequence
MSATSLGETL HRLVHAYKKQ LRADIAAQQI ELPVTHIRAL KGICRHPEAT AQSIALRMQR 
DKAQITRVLN ELQQAGYILK VDNPKDGRSQ LLRPTAQGEQ LMTQIIAAEK ATVAHMTQAL
DQDEIAVFIR IANQISDSVA ES