Gene Shewmr7_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0088 
Symbol 
ID4255550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp100052 
End bp100783 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content50% 
IMG OID638120683 
Producthypothetical protein 
Protein accessionYP_736151 
Protein GI114045601 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA CGATTTTCAC CCTGTCGCAA TTTGTGCATA TTACCGCGGG CGCACTGGCA 
TTAGTGTTAT TTTGGATGCC TGCCATGCTG AAAAAGGGCA GCGCGAACCA TAGTCGTTTT
GGCCGTTATT ATGTTTATGC CATGTACACA GTGGCGGCGA CGGGCGTGAT GATGGCAACG
GCGGGCCTCA TTGATCCGCT CGCGGTGATT AAACAGCCTG CGGCCAGCGC CGATGCTTTA
GCAGCGCAGA TTGCGGATCG TAAAAATGCT TGGATATTTC TCATCTATAT CAGCTTGTTA
ACCCTCGTAA CCGTTAGGCA TGGCGTGTTA GTTCTGCGTT ATAAGGCGCA GCGTCAGCAA
TTAAAATCGC CGCTGCATTT GTCGTTAATG CTGAGCTTGA CGTTACTTGG CCCCGTGATG
GCGATATGGG GATACCAAGA AAAGCTGATC CTCGCGATGA TTTTCGGCCT GTTAGGCACT
ACGGTTGGGG CGGGATTCTT GCGTTATAGC GTTAAGGCGA CCCTGACCAA ATTAGAATGG
TGGATTGAGC ATTTAGGCGC CATGATTGGC TCGGGTATCG CCTGTTACAC CGCCTTTTTC
GCCTTTGGTG GCAGCCGTTT GTTTATCGAC CATGGCAATT TGCGTCTGCT GTCGTGGACA
CTGCCAGGTG TTATCGGTTT TGTGGTGATC CGCTATTTAA GCGGCAAGTA TCAACGTCGT
TTTGCGGATT AA
 
Protein sequence
MMNTIFTLSQ FVHITAGALA LVLFWMPAML KKGSANHSRF GRYYVYAMYT VAATGVMMAT 
AGLIDPLAVI KQPAASADAL AAQIADRKNA WIFLIYISLL TLVTVRHGVL VLRYKAQRQQ
LKSPLHLSLM LSLTLLGPVM AIWGYQEKLI LAMIFGLLGT TVGAGFLRYS VKATLTKLEW
WIEHLGAMIG SGIACYTAFF AFGGSRLFID HGNLRLLSWT LPGVIGFVVI RYLSGKYQRR
FAD