| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0079 |
|---|
| Symbol | |
|---|
| ID | 4255804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 94358 |
|---|
| End bp | 94906 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 638120674 |
|---|
| Product | HPP family protein |
|---|
| Protein accession | YP_736142 |
|---|
| Protein GI | 114045592 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3448] CBS-domain-containing membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTT ACTTCACCCG AATGCGTTCT AAGGACATCT GTCCGCCACG ACAACCCCTG
AAAAAGATCG TTTGGTCATG GATAGGGGCC TTTTGTGGTA TTTATTTAGT CGCCAGTCTC
GCCACTTATA TGGGCGAACA TCTGCTCGGC ACTATGTTTG TGATTGGCTC ATTTGGAGCG
TCGGCGGTAT TAGTCTATGG TGCGCCGCTA GCAGAGTTTT CTCAGCCACG TAACTTGATT
GGCGGCAGTG TGCTATCGGC ACTGATTGGT GTGGCTGTTT ATCAAGTGTT TGCCGATTAT
ATGGTGCTCG CGAGTGCGCT AGCCGTATCA CTCGCCATCG CATTGATGTA TTTAACTCGC
ACGCTGCATC CACCGGGCGG CGCAACGGCG TTAATTGCCG TGATAGGCGG TGAGAACGTG
CATCAACTCG GGTATCTCTA TGCGTTGATG CCAGTCTTTC TCGGCACATT GCTGCTATTG
CTGGTGGCGC TGGTCGTGAA TAATCTCTCC ACCGATCCCA AACGCCACTA TCCAGTCTAT
TGGATTTAG
|
|---|
| Protein sequence | MRFYFTRMRS KDICPPRQPL KKIVWSWIGA FCGIYLVASL ATYMGEHLLG TMFVIGSFGA
SAVLVYGAPL AEFSQPRNLI GGSVLSALIG VAVYQVFADY MVLASALAVS LAIALMYLTR
TLHPPGGATA LIAVIGGENV HQLGYLYALM PVFLGTLLLL LVALVVNNLS TDPKRHYPVY
WI
|
|---|
| |