Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0068 |
Symbol | |
ID | 4256602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 81566 |
End bp | 82609 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120663 |
Product | transcriptional regulator |
Protein accession | YP_736131 |
Protein GI | 114045581 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0711239 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGA TCACTATTTT GGCGACGGAC AATACGGTTG CCAGCGGGAT TATTGGTTTT CTCGATGTGT TTAGTTTCTG CAATACCTAT TGGCGGCGAG TCAATCCACA GGCCGAACAA GACCTGTTTG AGTGCCAAGT GGTGTCGAGT CATGGCGGTG ATATCCTAAC GAATCAAGGT ATTAAAGTGC CTGCCGTTGG GCTTAATACT CCGAGTGATA TTCTGCACTC TGATGCGGTG ATTTTGGCTT CGGCCATGGT GACTAATAAG AACGAATTCC AAACCTATCT CAATGATTTT GAATCCTTAT TCGAACCGTT AAGGCTATTT GCTGCCTCAG GAAAACCATT GGCGGCCTAT TGCTCCGGCA CCTTGATTTT AGCGGCCACC GGCCTGCTGG ACGGGCGCGA GGCGACGACT GTCTGGTGGC TGAATGAGAT GTTTCAGCGA CACTTTGCCA AAGTGAACCT GCGGATGGAC AAGCTGGTGG TGTCCGACGG CCATCTGCAT ACCGCAGGGG CGACAACCTC GAATATGAGC CTCGCCCTGC ATTTAGTGCA CATTTTGGTG GGTGAGCAGT TAGCAAGCCA GATGGCAAAA ATCCTGCTGA TTGATCCTAA TCGCCAATCC CAACAACCCT TTATGACCAT GGATCTGATG ACGTCGAGCC ATAAGGACGA GGTGATTTGG AATGTGCAGC AATGGATGCA GCATCATTTA ACCGAACCGC TGTTACTGGA TGATATTGCT GATAAATTTG CTTTAGGTAA GCGCACCCTT ATTCGCCGCT TTAAAAAGGC ATTAAACGAG ACTCCGGCCA GCTATGTGCA GCGCCTGCGG GTGGATGAGG CAAAACGCCT ATTGGAAACG ACCAGTTTAG GCTTAGAGGA AGTGGTCACC CGTGTGGGTT ATGAGGATGT CAGCTCGTTT CGCAAATTGT TCATTCAGCT AACGAGCTTA ACCCCAAGGG CCTACAGGCA GCGCTTTAAT ACTCAGCAAT ATGAGTTTGA TAGCGACAAC TGCTGCGAGG CCGAACTGCA TTAA
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Protein sequence | MKRITILATD NTVASGIIGF LDVFSFCNTY WRRVNPQAEQ DLFECQVVSS HGGDILTNQG IKVPAVGLNT PSDILHSDAV ILASAMVTNK NEFQTYLNDF ESLFEPLRLF AASGKPLAAY CSGTLILAAT GLLDGREATT VWWLNEMFQR HFAKVNLRMD KLVVSDGHLH TAGATTSNMS LALHLVHILV GEQLASQMAK ILLIDPNRQS QQPFMTMDLM TSSHKDEVIW NVQQWMQHHL TEPLLLDDIA DKFALGKRTL IRRFKKALNE TPASYVQRLR VDEAKRLLET TSLGLEEVVT RVGYEDVSSF RKLFIQLTSL TPRAYRQRFN TQQYEFDSDN CCEAELH
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