| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0062 |
|---|
| Symbol | |
|---|
| ID | 4256596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 73751 |
|---|
| End bp | 75235 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 638120657 |
|---|
| Product | sucrose phosphorylase |
|---|
| Protein accession | YP_736125 |
|---|
| Protein GI | 114045575 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0945971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000350237 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC AAGTGCAATT GATCACCTAT GTCGATCGGA TAACCGGTGC CGGACTCAAA
CAACTCAAAG CCTTACTCGA TAATGAGTTA GATGGTTTAT TTGGGGGCGT TCATCTACTG
CCCTTTTACT ATCCCATCGA TGGCAGCGAT GCGGGGTTTG ATCCCATAGA CCATGTACAA
GTGGACTCAC GCTTAGGTGA TTGGGACGAT GTCAAAAACA TAGGCGAAGC GTTCGACATC
ATGGCCGACT TGATCGTTAA CCACATGTCC GCAGAATCTC CCGAGTTTAA AGATGTGCTC
AAGCATGGCA AACAATCGGT TTACTGGGAT TTATTCCTGA CCAAGGACAA GGTATTCCCT
GAGGGATTAA GTGAACAGGA TCAAAAAGCT ATCTATCGCC CCCGCCCAGG GAGCTGCTTT
AGCACTTACA CCTTAGCGGA TGGTTCAACG GAAGAATTTT GGACCACCTT TACCCGTAAC
CAGATCGATA TCGATGTTAA CTCAGCTGCA GGTAAGGATT ATTTAAACCG CGTATTGGCG
CGATTTAACC ACAGCAAAGT CAATTTAATC CGCTTAGATG CCGCAGGGTA TGCAATCAAA
AAGCCCGGTA CTAGCTGCTT TATGATTGAA GAGTCCTTCG AGTTTGTGGA TAAATTAGCG
AAGCAAGCCA ATGAGTTAGG TATGACAACC CTAGCCGAAA TCCACTCCCA TCATATGACG
CAAATCGATA TCGCCAAACG AGTGGACATG GTTTACGACT TCGCCCTGCC ACCGCTCATC
CTGCACACGC TGTTTAGCCA AGATTGTAGC GCCCTGAGTC ACTGGCTAGA CATGGCCCCT
CGCAACTGCA TTACCGTTCT CGATACCCAC GATGGCATTG GTATTATCGA TGTCGGCCCA
ATGGATGGCT TACGCGGATT ATTGGACGAA AAACAAATCG ATAATCTGGT CGAAACCATA
CACGACAACA GTAAGGGCGA GAGTCTACAA GCCACAGGTG CGGCCGCCAG CAATGTCGAT
TTGTATCAAA TCAACTGCAC CTATTACGAT GCCCTAGGGC AAAATGACCT AGATTACTTG
ATGGCGCGAG CAATTCAGTT TTTCGCACCG GGTATTCCGC AGGTCTACTA CACTGGCCTG
CTTGCCATAC CCAACGACAT GACGTTGCTG AATCAAACCC ATGTTGGCCG AGATATTAAT
CGCCCCTATT TAAACCGGGA AAAAGTGCAG CAAGCCCTGC AAAAACCTGT GGTTAAAGCC
CTCATCCAAT TGATTAAACT GCGTAATAGT AGCGCAGCAT TCAATGGCCG CTTTTCGATG
GCAGCAAGTG GCAAAACACT GACTCTCACA TGGTCCGCAC AAAATGCATC GGCCAGTCTT
AGTCTCGACT TTGTCCATAA ACAAGGATTG ATCACCCTGC TTGATGAGCA AGGCATCGAA
ACCCAAATCG CATTAGCAGA CCTGCTCACT CAAGCACAGG CCTAA
|
|---|
| Protein sequence | MKNQVQLITY VDRITGAGLK QLKALLDNEL DGLFGGVHLL PFYYPIDGSD AGFDPIDHVQ
VDSRLGDWDD VKNIGEAFDI MADLIVNHMS AESPEFKDVL KHGKQSVYWD LFLTKDKVFP
EGLSEQDQKA IYRPRPGSCF STYTLADGST EEFWTTFTRN QIDIDVNSAA GKDYLNRVLA
RFNHSKVNLI RLDAAGYAIK KPGTSCFMIE ESFEFVDKLA KQANELGMTT LAEIHSHHMT
QIDIAKRVDM VYDFALPPLI LHTLFSQDCS ALSHWLDMAP RNCITVLDTH DGIGIIDVGP
MDGLRGLLDE KQIDNLVETI HDNSKGESLQ ATGAAASNVD LYQINCTYYD ALGQNDLDYL
MARAIQFFAP GIPQVYYTGL LAIPNDMTLL NQTHVGRDIN RPYLNREKVQ QALQKPVVKA
LIQLIKLRNS SAAFNGRFSM AASGKTLTLT WSAQNASASL SLDFVHKQGL ITLLDEQGIE
TQIALADLLT QAQA
|
|---|
| |