| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0060 |
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| Symbol | |
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| ID | 4256594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 71126 |
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| End bp | 72574 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 638120655 |
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| Product | major facilitator transporter |
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| Protein accession | YP_736123 |
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| Protein GI | 114045573 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000451117 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCCAG CGTCTGCTTC GTCCCAACAT GAGCCTCTGC CCACCTCGGT TTTTCTGGCG
ATTTTCTCTG CCGTATTCTT ACCCATGTTT CTGGCGGCGG TCGATCAAAC CCTACTCGCC
ACCGCAACCC CTGCGATAGT GGAAGATCTT GGCGGCCTCA GGCAAGCCTC GTGGATCACT
ATCGGTTATA TGCTGGCGAT GGCGGCCAGT GTGCCTATTT ACGGCTGGCT AGGGGATAAC
TTTGGCCGCG CTAAAATCCT GATGATCGCC TTAGTGGTGT TTGCGTTGGG TTCAATCGTT
TCCGCCAGTG CCAGTACGAT GGACCATATG ATTGCTGGGC GAATACTCCA AGGTCTCGGC
GGTGGCGGGC TGATGAGTCT GTCCCAATCC CTTGTGGGGG AATTGGTGCC GATACGGCAA
AGGGCGCGTT TTCAGGGCTA TTTTGCCGCT ATGTTTACCC TCGCCAGTGT TGGCGGCCCT
GTGATTGGTG GCTTTGTGGT GCATGCCTAT TCTTGGCACT GGTTATTTTG GGCGAATATT
CCTTTGGTCA TGCTGGCGGT TTGGCGACTT AATCGCTTGC ATAAACAGAG CGTTAAACCG
GTGCGGCAAG GGCGGTTTGA CTTACTCGGC GTACTGTTAT TTCCCACGAT CATCACGGCG
CTGCTGTATT GGTTGTCAGT GGCGGGGCAA GACTTTGCTT GGCTATCGAC CACAAGTTTA
GGCTTTATGG GATTTATCTG TGTGGGCGCC CTAGTGCTCT TGTGGTGGGA GCGTCGGCGA
GAGAGTCCTT TCTTACCGCT GGATTTACTC GCCAATAAAG CCATTTATAT GCCGCTCTTC
ACGGCCGCGC TGTTTGCCGC CTGCCTGTTT GCGATGATCT TCTTTTTACC CATTTACTTG
CAGGTCGGTC TGCACACCAA TCCGGCCAAA ACGGGCTTGC TGCTGATGCC AATGACCTTT
GGCATAGTGA CAGGTTCCAC CATCGCTGGC AGGCTGTTGA GTCGGGATGT GGCGCCTAAA
TGGTTGCCGA CCTTCGGCAT GGGCTTGGCC TTTATCGGCT TGCTCTTAAT CGGTTTAGTG
CCGCCGAATG CGAATTTGAT CGGCGCTTTA GGTGTGCTGG TGGGCATTGG CTTAGGGACT
GTGATGCCTA GCGTGCAGCT AGTGGTGCAG AGCGTGTCGG GCAAGGCGCG TTTAAGCCAA
ATCACCGCTA TGGTGTCCTT GAGTCGTTCC ATGGGCGCGG CAATTGGTAC GGCTTTGTTC
AGTCTGTTGC TATATGGCTT ATTACCGCTC GACGGGGCGC AGGTGGGAAT TGCGGCAATA
AAGCAGTTAC CCATAGAGGT TGTGCATCAC GCCTTCCAAT GGGGTTTTAT CGCGGCAGCT
CTGGTGGCGC TCAGCTCGGC GATTGTGGGT TATTTCTCGC CTGCGACTGC GCTTAGGGAT
CATGAGTAG
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| Protein sequence | MTPASASSQH EPLPTSVFLA IFSAVFLPMF LAAVDQTLLA TATPAIVEDL GGLRQASWIT
IGYMLAMAAS VPIYGWLGDN FGRAKILMIA LVVFALGSIV SASASTMDHM IAGRILQGLG
GGGLMSLSQS LVGELVPIRQ RARFQGYFAA MFTLASVGGP VIGGFVVHAY SWHWLFWANI
PLVMLAVWRL NRLHKQSVKP VRQGRFDLLG VLLFPTIITA LLYWLSVAGQ DFAWLSTTSL
GFMGFICVGA LVLLWWERRR ESPFLPLDLL ANKAIYMPLF TAALFAACLF AMIFFLPIYL
QVGLHTNPAK TGLLLMPMTF GIVTGSTIAG RLLSRDVAPK WLPTFGMGLA FIGLLLIGLV
PPNANLIGAL GVLVGIGLGT VMPSVQLVVQ SVSGKARLSQ ITAMVSLSRS MGAAIGTALF
SLLLYGLLPL DGAQVGIAAI KQLPIEVVHH AFQWGFIAAA LVALSSAIVG YFSPATALRD
HE
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