| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0054 |
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| Symbol | |
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| ID | 4256588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 64899 |
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| End bp | 66572 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120649 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_736117 |
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| Protein GI | 114045567 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0736236 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000664675 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCTCGAAA ATCAAATGAT GTTACTGGCG GTATTTGAAC GGGCAGCCTT GATGCTGATG
ACCTTGTTCT TTTTAACCCG CACTCGACCG TTCCAGCGTT TATTCCAAAA GCGTAATCAC
ACGCCCGCAG AGCTGGTCTC TGTGGCGGCG ATATTTTGCT TATTTGCGGT GTTCAGTACT
TATACCGGCA TTGAGGTTGA AGGCGCGCTG GTTAACGTGC GGATTATCGC GATTATTTCC
GGCGGGATTC TATTTGGCCC TTGGGTTGGT ATTCCCGCAG GCGTGCTATC GGGGCTGCAT
AGATATCTGA TTGATATGGA TGGCGATACT TCTATCCCGT GTTTAATCGC CAGCATTATT
GCCGGTCTAA TGGCGACCTG GATTTACTAT AAATGTCCCA AATCTAAGTT GTGGATTTAT
GGCATTGCGG CGGGCATGTT GTGCGAAACA CTGACCATGT TGTTGATTTG GCTGCTGACA
GAGCCACACG AGGTAGGCGT TGAGATAGTG AGTCACATTG CCTATCCCAT GATTGCGGGC
ACTGTGTGTA TTGGACTTAT CATCAAGCTA GTGCAGGACC TCGACGATGA GAAAGAACTG
ATTGCCGCTA AGCAGGCCAA GCTCGCGCTG GATATTGCCA ACAAAACCTT ACCTTTCTTC
CGCAAAATTG ATCGCCAAGC CTTAGAGCAA GTGTGCGCCG TGATCCGTAA TGAGATCCAT
GCCGATGCCG TGGCGATTAC CGATACTCGC GATGTATTAG CCTATATGGG CGTTGGTAAA
GATTACTACG AGGTTGATGG TCATCAGGCC ATTAGTGAAA TGACGCAAAG GGCGATAGAG
CTAGATCAAA ACATTATTAA CAACGACTTA CGCCAATATC ATTTATCGGA TTTTCATTCG
GTCATCATAA TTCCGCTGCG CGAAAACGGC ACGGTAAGTG GCACATTGAA GATTTACTAC
CGCAATAACT ACCGGATTAC CAGCTCACTG CGGGAGATGG CGGTGGGCTT GTCGCAGTTG
ATTTCGACCC AGATTGAGGT GTCGCGCATC GAGCAACTGC AAGAGATGAC CCGTAAGGCG
GAGTTCACTG CACTGCAGAG CAAGATTAAC CCACACTTTT TGTTTAATGC CCTCAATGCG
ATTTCTTCTT TGATCCGCAT TCGACCACAG CAGGCGCGGG AGTTGATTGC CAATCTGGCC
GATTATCTGC GTTATAACTT AGACAAAGGC GATGAGCTGA TTGATATCCA AGAAGAAGTT
AAACAAGTAC GCGATTATGT GGCGATAGAG CAGGCGCGCT ATGGCGACAA GCTTGAAGTG
GTATTCGATG TCGACGATGT GCATTTTTGT GTGCCTTGTC TCCTGTTACA GCCGCTGGTG
GAAAACGCCA TTTTGCACGG CATTCAGCCG CGTAGTGCGC CGGGCAGAGT GACCATAGAA
GTGAAAAAAC TCGATGCTGG CATTCGGGTG GCCGTGCGTG ATACGGGTTA TGGCATTAGC
CAAGAGGTAA TTGATGGTGT CGCCGCCGGT CGTATCGAGA GCAGCAGTAT TGGACTGACG
AATGTGCACC AGAGGGTGAA GTTATTGTAC GGTGAAGGGT TACAGCTTAA ACGGCTAAAT
CCGGGGACCG AAGTCAGCTT TTATTTACCA GAAAATGAGG CGCAAGTATG TTAA
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| Protein sequence | MLENQMMLLA VFERAALMLM TLFFLTRTRP FQRLFQKRNH TPAELVSVAA IFCLFAVFST
YTGIEVEGAL VNVRIIAIIS GGILFGPWVG IPAGVLSGLH RYLIDMDGDT SIPCLIASII
AGLMATWIYY KCPKSKLWIY GIAAGMLCET LTMLLIWLLT EPHEVGVEIV SHIAYPMIAG
TVCIGLIIKL VQDLDDEKEL IAAKQAKLAL DIANKTLPFF RKIDRQALEQ VCAVIRNEIH
ADAVAITDTR DVLAYMGVGK DYYEVDGHQA ISEMTQRAIE LDQNIINNDL RQYHLSDFHS
VIIIPLRENG TVSGTLKIYY RNNYRITSSL REMAVGLSQL ISTQIEVSRI EQLQEMTRKA
EFTALQSKIN PHFLFNALNA ISSLIRIRPQ QARELIANLA DYLRYNLDKG DELIDIQEEV
KQVRDYVAIE QARYGDKLEV VFDVDDVHFC VPCLLLQPLV ENAILHGIQP RSAPGRVTIE
VKKLDAGIRV AVRDTGYGIS QEVIDGVAAG RIESSSIGLT NVHQRVKLLY GEGLQLKRLN
PGTEVSFYLP ENEAQVC
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