| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0052 |
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| Symbol | |
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| ID | 4254945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 62217 |
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| End bp | 63263 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120647 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_736115 |
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| Protein GI | 114045565 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00327886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTTTTG CAAATACAGC CTCCATCAAC CAATACTGGC GCACGCATCC CGCGTTATTT
ACCGCCATGC TGTTAGTGAT TGCTCTGCTC ACTAGCTATT TGATTGATTA CTTTTCAGGC
TCAGCCATTG CCGTACTACT TATCCTGCAA TTAGCCGTGG TCGCCGTGGC CCTGCAATGC
AGCGCCAACT ACGCCTATTT TGTGGCCGTG TTTGGCGCCG TCAGCTTCAA TTTTTTATTC
ACCACGCCGC GCTATTCGTT GCAGATGTTC AACGTCGAAG ACATAGTCAA TCTAAGCGTG
TTTTTGCTGG TCGCCCTCAC TAGCAGCAAG TTAGCCGAAC ATTACCGCCG CCAGCAGCAG
GCACTCGAAC AGGCACAGCT CAGAAATAGC ATTTTGCTCT CTGTCTCCCA CGATTTACGC
ACGCCGCTTG CGACCATTAT CGGCACCTTA ACCACGCTGA AGGAATACCA AGCTAAACTC
AGCCCAGAAC AAAACGAGGA GCTTATCGAC TCGGCCGCCG CCGAGAGTCA TCGCCTGCAC
CAATATATTG AAAACCTCTT GCAGGCCACT AAGTTACAAC ATGGCGCACT CAAATTTAGC
CTAGACGAAG CCAATCTACG CGAAGTGTTA CAGCGCACTA TTGCCCGCTT TCAAACCGCG
CAACCTAGGA TCCAAATTCA CAGTGAGCCA GAGCTACCGC CATTAATGAT TTGTAGCTCT
CTGATTGAAC AGGCGATTTT TAATGTGCTC GACAATGCCC TGCGCTACTC GCCCGCAGAA
CTGCCTGTTA CGGTAAACCT GTACCGCCAC CAACAGCTGC TGCGCATCGA TATTCAAGAC
TTAGGACAAG GCATAGCGCC AGCCGACGCC GAGGCCATTT TCGAGCTGTT CTATCGTCAA
CATCCCTCGA CCGATGGCGG TGCGGGATTA GGCCTAGCGG TCGCCAAAGG CATTATTACC
GCCCACAGGG GCAGCATCGG CGCCGAAAGT GTCGCCCAAG GCAGCTTAAT CCGCATCGCT
TTACCCATAA CCACGGAGGC GGCATAA
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| Protein sequence | MTFANTASIN QYWRTHPALF TAMLLVIALL TSYLIDYFSG SAIAVLLILQ LAVVAVALQC
SANYAYFVAV FGAVSFNFLF TTPRYSLQMF NVEDIVNLSV FLLVALTSSK LAEHYRRQQQ
ALEQAQLRNS ILLSVSHDLR TPLATIIGTL TTLKEYQAKL SPEQNEELID SAAAESHRLH
QYIENLLQAT KLQHGALKFS LDEANLREVL QRTIARFQTA QPRIQIHSEP ELPPLMICSS
LIEQAIFNVL DNALRYSPAE LPVTVNLYRH QQLLRIDIQD LGQGIAPADA EAIFELFYRQ
HPSTDGGAGL GLAVAKGIIT AHRGSIGAES VAQGSLIRIA LPITTEAA
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