| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0048 |
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| Symbol | |
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| ID | 4254941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 56438 |
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| End bp | 59131 |
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| Gene Length | 2694 bp |
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| Protein Length | 897 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638120643 |
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| Product | tetratricopeptide domain-containing protein |
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| Protein accession | YP_736111 |
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| Protein GI | 114045561 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00467809 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAACT ACGACGTTAA AGACCTTGCC GAATATATGC GACGAGCGAA GAGAGATAAT
AAACCTTTTG TTCTGTTTAC CGGCGCTGGT TGCTCAAAGA GTGCAGGTAT TCCACTGGCC
TCTGAGCTGG TGAATGAAAT TAACGAAAAG CATGCTCTCG ACCTAAAAGC GCTCTCAGCA
ACAGATAGAC ATGATTATGG TCGCTGCATG GCTGCGTTGA CAAAAGATGA CAGACGAGAG
TTGCTACAAG ATTATATTCA AAAGGCAAGA ATTAACTGGG CTCATATTGT ACAAGCCTTG
CTGTTGGAGA AGGGATATAT CCAAAGAGTC TTGACCTTTA ACTTTGATAA TATCCTTTCA
AGAAGCTGTG GCCTTCTCGG TCTTTACCCA TCAATTTACG ATTTTACCTC TGCAAACTTA
GATTTATTGA GCCTGATTAT CGATCCCTCG ATTGTTCACC TACATGGGCA AAGTCACGGT
TTTGTTCAGC TTAATACTGA GGAAGAAACT AAACGGCATG CGGAAAAGCT TAGTCAGTTT
GTTGCAAACA CACTGAACCA ATCCCCTAGT ATTTTCATTG GCTATAGCGG TAATGCAGAT
GCATTTTTCC CGCTGTTAAA AGATAAATTT ACCGATCAGA AAAGATTATT TTGGGTTGGC
CGTAGTGAGA AAGCTCCACA TCATGTTAAT GAGAATCTTA TTGCTCCCAA CAATGTTGCG
CACTACTTGC ACCATGAAGA TGCCGATCGA TTTTTTATCG AACTTGCCCA AGAATTAGAA
TGTTTTCCTC CAAAAGCGTT TGACGACCCA TATGGCCACT TATTGGATCA GTTGGAACCA
GTGCTTGACT TTCCAACCCA ACCGCACAAC GAACTTGATA TTCTGGCCTC AACTCGAAGT
ATGCTAAAAA AATCTCAAGA AGAGAGAGAG CAAAGAGCGA GACCAAACTT TGAGCGACTA
TTGATGAAAG GTAACTACAA TGAGCTCATT GTCTTGGCCA AAGATACAGA ACTGGACGAA
GAAGAAAAAG CGGTCGTTGC TTGGGCGGAA ATCGCTCTTG GGGACCAATT AGTAGAACAA
GCGAAAAAAG CGCAGCAGCA GAAGTTATTT GAGCAAAGTT TTGAAAAGTA TCAGGCCGCA
TTGGCTATTA AGCCTGACAT GTATGAAGCC CTTAACAACT GGGGAATAGC CCTTTCAGAG
TTAGCACAAC TTAAACAAGA GCCAGCCTTA TTTGAGCAGA GTATTGAAAA GTATCAGGCC
GCATTAGCGA TTAATCCTGA CGACCATGAA GCCATTAACA ACTGGGGAAT AGCCCTTTCA
GATTTAGCAC AGCTTAAACA AGAGCCAGCA TTATTTGAGC AGAGTTTTGA AAAGTATCAG
GCCGCACTAG CGATTATGCC TGACGACCAT CAAACCCTTT TCAACTGGGG AATAGCCCTT
TCAGAGTTAG CACAGCTTAA ACAAGAGCCA GCATTATTTG AGCAAAGTGC TGAAAAGTAT
CAGGCCGTGT TGGCGATTAA GCCTGATAAA CATGAAGCCC TTTTCAATTG GGGAAATGCC
CTTTCAGAGT TAGCACAGCT TAGACAAGAG CCAGCCTTAT TTGAGCAGAG TTTTGAAAAG
TATCAGGCCG TGTTAGCGAT TAAGCCTGAG AAGCATACAG CCCTTTTCAA TTGGGGAATA
GCCCTTTCAG AGTTAGCACA GCTTAAACAA GAGCCAGCCT TATTTGAACA AAGTATCGAA
AAGTATCAGG CCGCGTTGGC GATTAAGCCT GATAAGCATG AAGCCCTTTT AAATTGGGGA
AATGCCCTTT CAGAGTTAGC ACAGCTTAAA CAAGAGCCTG CCTTATTTGA GCAGAGTATC
GAAAAGTATC AGGCCGCGTT GGCGATTAAG CCTGATAAGC ATACAGCCCT TAACAACTGG
GGAAATGTCC TTTCAGAGTT AGCACGGCTT AAACAAGAGC CAGCCTTATT TGAACAAAGT
ATCGAAAAGT ATCAGGCCGT ATTGGCAATT AAGCCTGATG AGCATAAAGC CCTTTTCAAC
TGGGGAATAG CCCTTTCAGA GTTAGCACAG CTTAAACAAG AACCAGCCTT ATTTGAGCAA
AGTTTTGAAA AGTATCAGGC CGCGTTGGCG ATTAAGCCTG ATGAGCATGA AGCCCTTTTC
TACTGGGGAA TAGCCCTTTC AGAGTTAGCA CGGCTTAAAC AAGAGCCAGC CTTATTTGAG
CAGAGTTTTG AAAAGTATCA GGCCGTGTTG GCGATTAAGC CTGATGAGCA TGAAGCCTTT
TTCAACTGGG GAATAGCCCT TTCAGAGTTA GCACAGCTTA AACAAGAGCC AGCCTTATTT
GAGCAGAGTG CTGAAAAGTA TCAGGCCGCG TTGACAATTA AGCCTGACAA GCATCAAGCT
CTTAACAACT GGGGAATTGC CCTTTCAGAA TTAGCAAAGC TACAACAAAA AACAGAGTTA
TTTGAAGAGG CAAAATCTAA GTTCATACAA GCCCGCTCAC TTACCAATCA ACCGAACTAT
AACTTGGCTT GCATCTACTC TTTACTGCAT GATGATTTCA ATTGTAGAGA GGAACTACTC
GCCTGCTATA AGACAAAAAT ATTACCTGAT AAAAACCATT TGAACACTGA TTCGGACTTG
GATTTTGTAA GGGGTAAAGA GTGGTTTAAA GAATTATTAG ATACTCTACC GTAA
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| Protein sequence | MSNYDVKDLA EYMRRAKRDN KPFVLFTGAG CSKSAGIPLA SELVNEINEK HALDLKALSA
TDRHDYGRCM AALTKDDRRE LLQDYIQKAR INWAHIVQAL LLEKGYIQRV LTFNFDNILS
RSCGLLGLYP SIYDFTSANL DLLSLIIDPS IVHLHGQSHG FVQLNTEEET KRHAEKLSQF
VANTLNQSPS IFIGYSGNAD AFFPLLKDKF TDQKRLFWVG RSEKAPHHVN ENLIAPNNVA
HYLHHEDADR FFIELAQELE CFPPKAFDDP YGHLLDQLEP VLDFPTQPHN ELDILASTRS
MLKKSQEERE QRARPNFERL LMKGNYNELI VLAKDTELDE EEKAVVAWAE IALGDQLVEQ
AKKAQQQKLF EQSFEKYQAA LAIKPDMYEA LNNWGIALSE LAQLKQEPAL FEQSIEKYQA
ALAINPDDHE AINNWGIALS DLAQLKQEPA LFEQSFEKYQ AALAIMPDDH QTLFNWGIAL
SELAQLKQEP ALFEQSAEKY QAVLAIKPDK HEALFNWGNA LSELAQLRQE PALFEQSFEK
YQAVLAIKPE KHTALFNWGI ALSELAQLKQ EPALFEQSIE KYQAALAIKP DKHEALLNWG
NALSELAQLK QEPALFEQSI EKYQAALAIK PDKHTALNNW GNVLSELARL KQEPALFEQS
IEKYQAVLAI KPDEHKALFN WGIALSELAQ LKQEPALFEQ SFEKYQAALA IKPDEHEALF
YWGIALSELA RLKQEPALFE QSFEKYQAVL AIKPDEHEAF FNWGIALSEL AQLKQEPALF
EQSAEKYQAA LTIKPDKHQA LNNWGIALSE LAKLQQKTEL FEEAKSKFIQ ARSLTNQPNY
NLACIYSLLH DDFNCREELL ACYKTKILPD KNHLNTDSDL DFVRGKEWFK ELLDTLP
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