Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0045 |
Symbol | |
ID | 4254938 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 53284 |
End bp | 53769 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120640 |
Product | preprotein translocase subunit SecB |
Protein accession | YP_736108 |
Protein GI | 114045558 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1952] Preprotein translocase subunit SecB |
TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00254567 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGAAG TAGCAAACAA CGAACAACAA GCCCCACAAT TCAACATCCA ACGTGTTTAC ACCAAAGATG TTTCTTTCGA AACACCTAAC AGCCCAGCTG TATTCCAAAA AGAATGGAAT CCAGAAGTTA AGTTAGATTT AGACACTCGC AGCGCTAAAT TAGCCGACGA CGTATACGAA GTGGTTCTGT CTTTGACTGT GACTGCACAA AACGCTGGCG AAACTGCATT CCTGTGTGAA GTACAACAAG CGGGTATCTT CTCAATCGCA GGTCTGAGTG AGCCACAACT GGCTCACTCA TTAGGTGCAT ACTGCCCTAA CATCCTATTC CCATATGCGC GTGAAGCTGT AGGTAGCTTA GTGGGTCGTG GTACTTTCCC ACAACTGAAC TTAGCACCAG TAAACTTCGA CGCTCTGTTC GCACAATACG TGCAACAACG TCAAGCCGCA GCAGCTGCAC CAGCAGCCGA AGAAGCTAAC GCTTAA
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Protein sequence | MAEVANNEQQ APQFNIQRVY TKDVSFETPN SPAVFQKEWN PEVKLDLDTR SAKLADDVYE VVLSLTVTAQ NAGETAFLCE VQQAGIFSIA GLSEPQLAHS LGAYCPNILF PYAREAVGSL VGRGTFPQLN LAPVNFDALF AQYVQQRQAA AAAPAAEEAN A
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