Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0042 |
Symbol | |
ID | 4254935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 49634 |
End bp | 50767 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120637 |
Product | peptidase M23B |
Protein accession | YP_736105 |
Protein GI | 114045555 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG4942] Membrane-bound metallopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.701038 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00314235 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCACTC GACTCCCCGT TAAAGCCAGC ATTATTGCTG GCTTTATGAT GTTATCTTTC TCGGTCTACG CTTCTGATTT GGAGAAGCGT CAGTCCGAGT TGAAATCCAT CCAAGCGCAA ATCAACCAGC AACAAAGTGC GCTCAAAAAC ACCAGTAAAC AGCGGGAAAA GTTACTCGCT CTGCTGCGTA GTGACGAAGA GGCGATTGCG GCGGCAGCCA AAAAGGTCAA TAGCACCAAA AACAGTTTGG CGCAGATTGA TACTAAGCTC GCCGAACTCA AACAACGCCA AGAAGAGTTA GAAACCCTCA AGGTCAGCCA GCAAAAAACG CTCTCAAAAC AACTCTCGAG CGCCTATCTT GCCGGTAACC ACGATTACAC TAAGATGATG CTGAATCAGC AGAGTCCCGC GACGATTGAG CGGATGTTGG CCTATTACCA ATACCTCAAC AAAGCACGCA TGAACTCGAT TAACGAGTTA AAGAAAACCA TCACCGAACT AGATGAAATT AAAGTCTCGC AAACCAGCAA GCAAAAACAA TTAACTAAGC TGATGGCCGA GCAACAAGTG CAATCTAAGC GCTTGAACCA AGAACAAGAT CAACGCCAGC TCACCCTAAA AGAATTACAG CGCACCCTGA ATACCAAGGG CGCCGAACTC GAACAACTGC AAATTGAAGA AGCCAGCTTA AAACGAGTGG TTGAGCAAGC GCTTAAGGCG ATGCGTGATA ACCCCTCGAT GGAAGGCTTC GATAAACAAG GCGGCAAACT CAAGTGGCCG ACCAAAGGTC GTGTCAGTGC CAGCTTTGGC AGCCCAAGAT CCGGCCAAGT GGTGTGGAAA GGCACTATGC TCTCCGCACC CGAAGGGCAA AATATTCGCG CGGTTTCTGG CGGTAAAGTC ATCTATGCCG ACTGGCTTAA AGGCTTTGGT ATGGTGATGG TGATAGACCA TGGCAAAGGT TATATGAGCC TCTACGGCCA TGCGCAGGCC CTGTTAAAAA GCCCTGGGGA CATGGTCAAA ACCGGTGAAG CTATTGCTTT AGTCGGACGT TCGGGTGGAC AGACAGAGCC TGGCCTATAC TTTGAAATAA GGTATAAGGG GCAAGCGGTC GATCCAGCCA AGTACTGTCG TTAA
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Protein sequence | MSTRLPVKAS IIAGFMMLSF SVYASDLEKR QSELKSIQAQ INQQQSALKN TSKQREKLLA LLRSDEEAIA AAAKKVNSTK NSLAQIDTKL AELKQRQEEL ETLKVSQQKT LSKQLSSAYL AGNHDYTKMM LNQQSPATIE RMLAYYQYLN KARMNSINEL KKTITELDEI KVSQTSKQKQ LTKLMAEQQV QSKRLNQEQD QRQLTLKELQ RTLNTKGAEL EQLQIEEASL KRVVEQALKA MRDNPSMEGF DKQGGKLKWP TKGRVSASFG SPRSGQVVWK GTMLSAPEGQ NIRAVSGGKV IYADWLKGFG MVMVIDHGKG YMSLYGHAQA LLKSPGDMVK TGEAIALVGR SGGQTEPGLY FEIRYKGQAV DPAKYCR
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