Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0040 |
Symbol | |
ID | 4254933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 47612 |
End bp | 48367 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120635 |
Product | protein of unknown function DUF610, YibQ |
Protein accession | YP_736103 |
Protein GI | 114045553 |
COG category | [S] Function unknown |
COG ID | [COG2861] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00288732 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGTCTAT TTTACATATT GGCCCTTTGG GCTCTGAGCA TTGCGCCAAG TAATGCGGCC CAAATCGCCT TGATCATCGA TGATATTGGC TATCGCCACA CCGACGAAGC CGTGCTGTCA CTCCCAAGCG CAGTCACCTT GTCGGTACTG CCACATACGC CGCTTAGCAA TAAATTGGCC AAAGCAGCGC ACGCCAAAGG GCACGAGATT ATGCTGCACT TACCCATGCA GGCACTCAAT GGTAAAGCCT TAGGTGTTGG TGGTTTAACG AATAATATGA GCGAAACACA GATACGTAGC AGTGTACTTG CAGCCATCGC CAGTGTGCCC TTTGCTAAAG GCGCCAACAA TCATATGGGA AGCCTGCTAA CGCAGCTCGA TGATCCTATG TTGTGGGTGA TGGAAACGCT AAAGCAGAAG CAGCTCTACT TTGTCGATAG TATGACCACC AAGTTCACTA AGGCGGGAGA TAAGGCGGAT TCGCTCGGCG TGCCACTGCT ACGACGCCAA CTCTTTCTCG ATAATGACGT CAGTGCCGCA GCATTGGAAA AACAGTTTAA TTTGATGATA AGTCAGGCTC ACTCGCAAGG CAGTCTAGTT GCTATCGCCC ATCCTTACCC AGAAACCATT CACTTCTTAA AAACAAACTT AGCGCGCCTA AAGGCGGAAG GGATTGAGCT AGTGCCGACG TCAAGCTTGT TGCCCATCGA ACTAGCCCAT GAGAAAGGGA CTAATCCAAC TGTAAGACAG AGATAG
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Protein sequence | MRLFYILALW ALSIAPSNAA QIALIIDDIG YRHTDEAVLS LPSAVTLSVL PHTPLSNKLA KAAHAKGHEI MLHLPMQALN GKALGVGGLT NNMSETQIRS SVLAAIASVP FAKGANNHMG SLLTQLDDPM LWVMETLKQK QLYFVDSMTT KFTKAGDKAD SLGVPLLRRQ LFLDNDVSAA ALEKQFNLMI SQAHSQGSLV AIAHPYPETI HFLKTNLARL KAEGIELVPT SSLLPIELAH EKGTNPTVRQ R
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