Gene Shewmr7_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0040 
Symbol 
ID4254933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp47612 
End bp48367 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content50% 
IMG OID638120635 
Productprotein of unknown function DUF610, YibQ 
Protein accessionYP_736103 
Protein GI114045553 
COG category[S] Function unknown 
COG ID[COG2861] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00288732 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCGTCTAT TTTACATATT GGCCCTTTGG GCTCTGAGCA TTGCGCCAAG TAATGCGGCC 
CAAATCGCCT TGATCATCGA TGATATTGGC TATCGCCACA CCGACGAAGC CGTGCTGTCA
CTCCCAAGCG CAGTCACCTT GTCGGTACTG CCACATACGC CGCTTAGCAA TAAATTGGCC
AAAGCAGCGC ACGCCAAAGG GCACGAGATT ATGCTGCACT TACCCATGCA GGCACTCAAT
GGTAAAGCCT TAGGTGTTGG TGGTTTAACG AATAATATGA GCGAAACACA GATACGTAGC
AGTGTACTTG CAGCCATCGC CAGTGTGCCC TTTGCTAAAG GCGCCAACAA TCATATGGGA
AGCCTGCTAA CGCAGCTCGA TGATCCTATG TTGTGGGTGA TGGAAACGCT AAAGCAGAAG
CAGCTCTACT TTGTCGATAG TATGACCACC AAGTTCACTA AGGCGGGAGA TAAGGCGGAT
TCGCTCGGCG TGCCACTGCT ACGACGCCAA CTCTTTCTCG ATAATGACGT CAGTGCCGCA
GCATTGGAAA AACAGTTTAA TTTGATGATA AGTCAGGCTC ACTCGCAAGG CAGTCTAGTT
GCTATCGCCC ATCCTTACCC AGAAACCATT CACTTCTTAA AAACAAACTT AGCGCGCCTA
AAGGCGGAAG GGATTGAGCT AGTGCCGACG TCAAGCTTGT TGCCCATCGA ACTAGCCCAT
GAGAAAGGGA CTAATCCAAC TGTAAGACAG AGATAG
 
Protein sequence
MRLFYILALW ALSIAPSNAA QIALIIDDIG YRHTDEAVLS LPSAVTLSVL PHTPLSNKLA 
KAAHAKGHEI MLHLPMQALN GKALGVGGLT NNMSETQIRS SVLAAIASVP FAKGANNHMG
SLLTQLDDPM LWVMETLKQK QLYFVDSMTT KFTKAGDKAD SLGVPLLRRQ LFLDNDVSAA
ALEKQFNLMI SQAHSQGSLV AIAHPYPETI HFLKTNLARL KAEGIELVPT SSLLPIELAH
EKGTNPTVRQ R