Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0033 |
Symbol | |
ID | 4257175 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 37546 |
End bp | 38454 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120624 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_736096 |
Protein GI | 114045546 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.011595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGC CAGATGCGAC AGTGGTAAAA GCATTTTTAC TCGATCTACA GAATCGAATT TGTGCTGGTC TTGAGCAATT GGATGGGCAA GCAAGCTTTG CGGCCGATTC ATGGACACGC ACCGAAGGCG GTGGCGGTAC CAGTCGTGTC TTAACTCAAG GTGCGGTATT CGAGCAAGCT GGGGTGAACT TTTCCCATGT AACAGGTGCG GCCATGCCTG CATCAGCAAC GGCTCATCGC CCAGAATTGG CGGGTCGTAG TTTTGAGGCC ATGGGCGTTT CTTTAGTGAT TCACCCTAAA AACCCTTATA TTCCAACTAC CCATGCTAAC GTGCGTTTCT TTATTGCCCA TAAAGACGGT GCGGATCCCG TTTGGTGGTT TGGTGGTGGT TTTGACTTAA CGCCTTACTA TCCTTTCGAA GAAGATGTGC GCGAGTGGCA TCAAACCGCT AAAAATCTGT GTCTGCCCTT TGGCGACGAC ATATATCCTA AATATAAGAA GTGGTGTGAT GAGTATTTCT TCCTGCCACA TCGTAATGAA ACCCGCGGCG TGGGCGGATT GTTTTTCGAT GACTTGAACC AAGCTGGCTT CGATAAGAGT TTCGATTTTA TGCAAGCGGT GGGGAATGGC TTCTTAACCG CTTATGCGCC GATTGTTGAG CGCCGTAAAG AGACGCCATA TGGCGAGCGT GAGCGTGAGT TCCAGTTATA TCGTCGCGGC CGTTATGTTG AGTTCAATCT GGTATACGAC AGAGGTACCT TGTTCGGCCT GCAAACTGGT GGTCGCACTG AGTCCATTTT GATGTCAATG CCGCCATTGG TACGCTGGCA ATATGCTTAT ACGCCAGAGG CGGGTAGCCC TGAGGCAGAT CTATACGATA ACTACCTCAA ACCTCGAGAT TGGGTATAA
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Protein sequence | MSVPDATVVK AFLLDLQNRI CAGLEQLDGQ ASFAADSWTR TEGGGGTSRV LTQGAVFEQA GVNFSHVTGA AMPASATAHR PELAGRSFEA MGVSLVIHPK NPYIPTTHAN VRFFIAHKDG ADPVWWFGGG FDLTPYYPFE EDVREWHQTA KNLCLPFGDD IYPKYKKWCD EYFFLPHRNE TRGVGGLFFD DLNQAGFDKS FDFMQAVGNG FLTAYAPIVE RRKETPYGER EREFQLYRRG RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWQYAY TPEAGSPEAD LYDNYLKPRD WV
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