Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0029 |
Symbol | |
ID | 4257171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 34630 |
End bp | 35646 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120620 |
Product | DNA protecting protein DprA |
Protein accession | YP_736092 |
Protein GI | 114045542 |
COG category | [L] Replication, recombination and repair [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0934581 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATGTGG ACGACCTCAG GCAAAGATTG GAGCATGAGA GGCACTCGCT CCCTTTGTCT GACAATCTAC TCCATAGCTT AGTCATTGAT TATCAAAGGG TCGATGCTGC CCTCGAATGG CAACAGCAGT CTGAACTACA CCACCTCGTT TGTTTTACCG ATCCCCTTTA TCCTCCATTA CTCAAACAGT TACCCGATCC TCCAAGCGTC TTATTTATCA AAGGATGTGT TGAGGCGCTG TTGTTCCCAT CGCTTGCGAT AGTGGGGAGT CGTAATGCGT CTCCCGGTGG ATTACAGGTT GCTTATCAGT TAGCTCGAGA GATGTCCGCG CTGGGATTCA GTATCTGTAG TGGCATGGCG ATGGGGATAG ATGGTGCGGC CCATAAAGCC TGTGTTGACC ACGGAGGCAG AACGCTCGCC GTGCTCGGAA CGGGGATTGA TATTATTTAT CCGCGTCGAC ATAAGCAGCT TTATGAGGAT ATTCAGCACC AAGGCTGTAT AATAAGCGAG TTTTGGCCGG ATATCGGCCC TTTTGCGGGC AATTTCCCGA AACGAAACCG CATTATTAGC GGTCTTTCTT TAGGTACCCT GGTGGTTGAG GCTTGCCGTA AGAGTGGTTC ACTCATCACC GCAAGGTTGG CCATGGAGCA GGGGCGTGAG GTCTTTGCGG TTCCGGGCTC GATTCTTGGC GGCTTTCATC AAGGCTGCCA TGATTTATTA CGGGATGGGG CAAAACTTGT GGAGAGTGCG GCCGATATAG TGGAAGAGCT GGTAAGTTTG ACGGCTTTTC ACCTTGAAGA AGTCAGCACT CGCCACCATA TACAGCAAGG TGAGATTTGT GATTTGCCAT TTTCATCGCT GTTAGCTAGT GTAGGTTATG AAACTACAAC AATTGATGCT GTAGTCGAAC ATAGTGGGAA AACGATAGAT CTGGTGTTAG AACAAATGCT TGAACTTGAG TTGCAAGGTT GGGTTGTTGC AGTACCCGGT GGTTACGTCA GAGTAAAGAG GAGCTAG
|
Protein sequence | MDVDDLRQRL EHERHSLPLS DNLLHSLVID YQRVDAALEW QQQSELHHLV CFTDPLYPPL LKQLPDPPSV LFIKGCVEAL LFPSLAIVGS RNASPGGLQV AYQLAREMSA LGFSICSGMA MGIDGAAHKA CVDHGGRTLA VLGTGIDIIY PRRHKQLYED IQHQGCIISE FWPDIGPFAG NFPKRNRIIS GLSLGTLVVE ACRKSGSLIT ARLAMEQGRE VFAVPGSILG GFHQGCHDLL RDGAKLVESA ADIVEELVSL TAFHLEEVST RHHIQQGEIC DLPFSSLLAS VGYETTTIDA VVEHSGKTID LVLEQMLELE LQGWVVAVPG GYVRVKRS
|
| |