| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0023 |
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| Symbol | |
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| ID | 4257165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 27650 |
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| End bp | 29092 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638120614 |
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| Product | TrkH family potassium uptake protein |
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| Protein accession | YP_736086 |
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| Protein GI | 114045536 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0882974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACT TTAGACCGCT ATTGTTTATT TTGGGGCTGT TTCTGTCGAT GTTAACAGCC
TTTATGTTAG CGCCCCTGCT CCTTGCCGTG TTCAACGGCG AGGAAACCGT GGGCGCTTTC
ATGCTGTCGG CTTTAGTCAC TGGGATTTGC GCCAGCCTCT GTTTGCATAA CGGCCAGAGC
AAAACCATTA ACCTCAATAT TCGCGATATG TTTCTTCTCA CCAGCCTCAC TTGGCTGATC
GTGAGCCTGT TTGCCGCCAT GCCTTTTACC TTGTACCACG GCATTGGCTA TACAGACGCC
TTCTTCGAGA CCATGTCCGG CATTACCACT ACAGGTTCAA CCGTGCTCTC GGGCTTAGAT
ACTATGGACC ACAGTATCTT AATCTGGCGC TCGTTGTTGC AATGGCTAGG CGGTATTGGC
TTTATCGTGA TGGCGGTAGC GATTCTGCCC TTCTTAAACG TCGGTGGTAT GCGGCTGTTC
CGCACCGAGT CATCGGATTG GAGCGATAAG GCGGTGCCGC GCACCCAAAG CATGGCTAAG
CATCTATTTT TTATCTATAT CTTGCTGACC GTGATGTGCT GCGTTGCCTA CCATCTTGCA
GGCATGACTT GGTTTCAAGC CATTAACCAT GCGATGACCA CACTGTCGAC GGGTGGCTAT
TCGACCTCAG ATAACTCGAT GGCGGCGTTT TCAAATTCAG CCCATTGGGT TGGCGTTGTG
TTTATGGCGG CGGGAGGTTT ACCACTGCTG ATGTTTGTGC AGATGATCCA GCAGCGAGAC
TTTACCGTCT GGAACGATGC ACAAGTTAAA GGTTTCTTGT TTTTCCTCAC TTTTGTGTCT
TGTTTTATTG GCTTCTGGCT GTGGCAAACG CGGGATATCG CCCTTATCGA CGCACTGCGC
CTCTCCAGCT TTAACGTGGT TTCCGTGGTC ACCACCACAG GTTATGGTTT AACCGACTAC
GGCGCTTGGG GCGCGTTTGC AAATATCGCG TTTTTATTCT TAATGTTTGT CGGCAGCTGC
TCGGGCTCCA CCTCTGGCGG GATTAAAATC TTCCGCTTCC AAATTGCCGG CGCCATTATG
CGCGAGCAGT TAAAGCAGCA ATGCCATCCC AATGGCATCT TCCGGGAGCG CTATAACAAC
CGTCTGATCA GTGAAGATAT TGTGCGCTCA CTGATCACCT TTGTGCTGCT CTTTATGTTT
GTGATTGTTG GACTTTCGGT GATTCTGGTG CTGACTGGGC TAGACCCCAT GACCAGCTTT
ACCGGCGCAA TAACCGCAGT CACCAACGTT GGCCCAGGGC TTGGCCCCAT CATTGGTCCT
GCGGGTAACT TCTCGACGCT GCCCGATTTG GCTAAATGGG CGCTTTCTTT GGGTATGTTG
CTCGGCCGCT TAGAGATTTT AACCGTGGCT GTACTGTTCC ATCCCAGTTT TTGGAAATAC
TAG
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| Protein sequence | MLNFRPLLFI LGLFLSMLTA FMLAPLLLAV FNGEETVGAF MLSALVTGIC ASLCLHNGQS
KTINLNIRDM FLLTSLTWLI VSLFAAMPFT LYHGIGYTDA FFETMSGITT TGSTVLSGLD
TMDHSILIWR SLLQWLGGIG FIVMAVAILP FLNVGGMRLF RTESSDWSDK AVPRTQSMAK
HLFFIYILLT VMCCVAYHLA GMTWFQAINH AMTTLSTGGY STSDNSMAAF SNSAHWVGVV
FMAAGGLPLL MFVQMIQQRD FTVWNDAQVK GFLFFLTFVS CFIGFWLWQT RDIALIDALR
LSSFNVVSVV TTTGYGLTDY GAWGAFANIA FLFLMFVGSC SGSTSGGIKI FRFQIAGAIM
REQLKQQCHP NGIFRERYNN RLISEDIVRS LITFVLLFMF VIVGLSVILV LTGLDPMTSF
TGAITAVTNV GPGLGPIIGP AGNFSTLPDL AKWALSLGML LGRLEILTVA VLFHPSFWKY
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