Gene Shewmr7_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0018 
Symbol 
ID4257160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp23804 
End bp24418 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID638120609 
Producthypothetical protein 
Protein accessionYP_736081 
Protein GI114045531 
COG category[S] Function unknown 
COG ID[COG1739] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00257] uncharacterized protein, YigZ family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.464651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0620683 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGAAA GTTATCTGAT ACCGAGTGAA AATGTGCAGA TAGAAGAAGA GATAAAGCAT 
AGCCGCTTTA TCTCTTTTCT ATTTCATTGC ACGAGCATAG AACAACTGAA GTTAGTACTT
ACTGACATCA AGCGAGATTT TCCCGGCGCC AGCCATTATT GCTATGCCTT TATCGCAGGA
GCGCCTAACG ACAGCATTAC CATCGGTTCG AGTGACGATG GTGAGCCAGC GGGCAGCGCT
GGTCGTCCAA TGCTCGCAGT ATTACAAGGC GCGAATCTCG GTGAGGTCGG TGCCGTGGTG
GTGCGTTTCT ATGGCGGTAC TAAGTTAGGC GTTGGCGGTT TAGTGCGTGC CTATACCTCG
GGATTACGCC AAGGTTTAGG GCAATTGCCG ACGCGAGTAA AGCAATTACG TTATCCGGCA
AAACTGCATT GCGATTACAC CCAATTAAGG GATGTTGAGC ATCTACTGCA GCAGTTAGAA
GCGGTGATCA TCGATAAGCA ATTTGCCGAA GCCGTTGATA TCCATTTTGA AATAGGCAAA
CAGCAGCAGG GCATATTGAA TGAATCGCTG GCAACTTTGA GTCAGGGCAG CCTGCGCGCA
GAGTTTGAGC TGTGA
 
Protein sequence
MLESYLIPSE NVQIEEEIKH SRFISFLFHC TSIEQLKLVL TDIKRDFPGA SHYCYAFIAG 
APNDSITIGS SDDGEPAGSA GRPMLAVLQG ANLGEVGAVV VRFYGGTKLG VGGLVRAYTS
GLRQGLGQLP TRVKQLRYPA KLHCDYTQLR DVEHLLQQLE AVIIDKQFAE AVDIHFEIGK
QQQGILNESL ATLSQGSLRA EFEL