Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0018 |
Symbol | |
ID | 4257160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 23804 |
End bp | 24418 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120609 |
Product | hypothetical protein |
Protein accession | YP_736081 |
Protein GI | 114045531 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.464651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0620683 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCGAAA GTTATCTGAT ACCGAGTGAA AATGTGCAGA TAGAAGAAGA GATAAAGCAT AGCCGCTTTA TCTCTTTTCT ATTTCATTGC ACGAGCATAG AACAACTGAA GTTAGTACTT ACTGACATCA AGCGAGATTT TCCCGGCGCC AGCCATTATT GCTATGCCTT TATCGCAGGA GCGCCTAACG ACAGCATTAC CATCGGTTCG AGTGACGATG GTGAGCCAGC GGGCAGCGCT GGTCGTCCAA TGCTCGCAGT ATTACAAGGC GCGAATCTCG GTGAGGTCGG TGCCGTGGTG GTGCGTTTCT ATGGCGGTAC TAAGTTAGGC GTTGGCGGTT TAGTGCGTGC CTATACCTCG GGATTACGCC AAGGTTTAGG GCAATTGCCG ACGCGAGTAA AGCAATTACG TTATCCGGCA AAACTGCATT GCGATTACAC CCAATTAAGG GATGTTGAGC ATCTACTGCA GCAGTTAGAA GCGGTGATCA TCGATAAGCA ATTTGCCGAA GCCGTTGATA TCCATTTTGA AATAGGCAAA CAGCAGCAGG GCATATTGAA TGAATCGCTG GCAACTTTGA GTCAGGGCAG CCTGCGCGCA GAGTTTGAGC TGTGA
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Protein sequence | MLESYLIPSE NVQIEEEIKH SRFISFLFHC TSIEQLKLVL TDIKRDFPGA SHYCYAFIAG APNDSITIGS SDDGEPAGSA GRPMLAVLQG ANLGEVGAVV VRFYGGTKLG VGGLVRAYTS GLRQGLGQLP TRVKQLRYPA KLHCDYTQLR DVEHLLQQLE AVIIDKQFAE AVDIHFEIGK QQQGILNESL ATLSQGSLRA EFEL
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