Gene Shewmr7_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0010 
Symbol 
ID4258043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp12339 
End bp12914 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content45% 
IMG OID638120601 
ProductDNA-3-methyladenine glycosylase I 
Protein accessionYP_736073 
Protein GI114045523 
COG category[L] Replication, recombination and repair 
COG ID[COG2818] 3-methyladenine DNA glycosylase 
TIGRFAM ID[TIGR00624] DNA-3-methyladenine glycosylase I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0579886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA TCCGCTGTAA TTGGGTCAGC GATGATCCCT TGTATCGTGA GTACCACGAT 
AAGGTGTGGG GGCGCCCAGT TTATGATTCG AAGGAGTTAT TTGCCAAGCT CTGTTTAGAT
GGCCAACAAG CTGGGTTGTC TTGGATTACT ATCTTAAAGA AACAACAAAA TTACGAACAA
GCCTTTGCGG ATTTTGAGCC GGCAGTGATT GCAACTTTCG ACGACGCTAA GGTAGAGGAG
TTGATGAACA ATCCTGGTAT TGTTCGTAAT CGCCTTAAGA TCCATTCGAT TATTCGAAAT
GCTAAGGGCT ACTTAGCTTA CACTGCGGAT GGTAAAGATT TTGCTGAATT TCTGTGGAGC
TTTGTTGGTG GTAAGCCTTT GGTGAATCAG TTTACTTCTA TGTCGCAGGT GCCTGCACAG
ACCCCGGAGT CAGAGGCCAT GTCCAAGGCG TTAAAAAAGC TCGGCTTTAA CTTTGTTGGC
CCAACGATTT GTTATGCTTT TATGCAGGCA GTGGGAATGG TGAACGATCA TCTAGTTGAT
TGCATCGCCT ATGATGCTTG CTGTGGCGGT AAATAA
 
Protein sequence
MEEIRCNWVS DDPLYREYHD KVWGRPVYDS KELFAKLCLD GQQAGLSWIT ILKKQQNYEQ 
AFADFEPAVI ATFDDAKVEE LMNNPGIVRN RLKIHSIIRN AKGYLAYTAD GKDFAEFLWS
FVGGKPLVNQ FTSMSQVPAQ TPESEAMSKA LKKLGFNFVG PTICYAFMQA VGMVNDHLVD
CIAYDACCGG K