Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0008 |
Symbol | glyS |
ID | 4258041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 9239 |
End bp | 11305 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638120599 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_736071 |
Protein GI | 114045521 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0754706 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTG AAAACTTACT CATAGAGTTA GGCACTGAAG AATTGCCGCC AAAGGCGCTG CGTAAACTGG CTGAGTCTTT CTTAGCGAAC TTCACCGAAG AATTAACCAA AGCCGATTTA GCTTTTAAAT CAGCAGCTTG GTACGCTGCA CCCCGCCGTT TAGCCATCAA TGTGACTGAA CTGGCGATTG CTCAAGCGGA CAAAATCGTT GAAAAACGCG GCCCAGCTGT CAGCTCAGCC TTTGATGCCG AAGGTAAACC AACAAAAGCC GCTGAAGGCT GGGCACGTGG TAACGGTATT ACCGTTGACC AAGCTGAGCG TTTGGTGACC GACAAAGGTG AATGGCTGGT ATATAACGCC AAAGTAGAAG GCGTTGAAAC CAAGAGCTTA ATCGCTGCTA TGGCACAACG TGCGCTGGAT AAGTTACCCA TTCCTAAGCC AATGCGCTGG GGAAGCAGCA AGACACAATT CATTCGCCCT GTTCACACCG CCACTATGCT GTTAGGCAGT GAGTTAATCG AAGGTGAATT GCTCGGCATT AAGTCGGCAC GTAATGTTCG TGGCCACCGC TTTATGGGTA CAGGCTTCGA GCTTGATCAT GCAGACAACT ACCTGACACT GCTGAAAGAA AAAGGTAAAG TCATCGCCGA CTACGAAAGC CGTAAAGCCT TAATCAAAGC CGATGCTGAA AAAGCGGCCG CTAAGATTGG TGGCACAGCC GATATCGAAG ACGACCTGCT GGAAGAAGTC ACCTCTTTAG TTGAATGGCC AGTCGTATTA ACAGCAAGCT TTGAAGAGAA GTTCTTGAAC GTACCTTCAG AAGCCTTGGT TTATACGATG AAGGGCGATC AGAAATACTT CCCAGTATTC GATGAAGCCG GTAAGTTACT GCCAAACTTC ATCTTTGTCG CGAACATCGA ATCAAAAGAT CCGGCACAAA TCATTGCGGG TAACGAGAAA GTGGTTCGTC CACGCTTGGC CGACGCAGAG TTCTTCTTCA ATACCGACAA AAAACACACG CTGGAATCAC GTTTACCGAG TCTTGAGACC GTCTTGTTCC AACAACAACT CGGCACCTTA AAAGACAAAG TCACTCGTAT CTCTGCCCTA GCCGCCTTTA TTGCCGAGCA AACTGGTGCT AACGCCGTTG ATGCCGCCCG CGCAGGTTTA TTGTCTAAAA CAGACTTAAT GACCAATATG GTGATGGAGT TTACCGATAC TCAAGGCACT ATGGGCATGC ATTACGCCCG CCTAGACGGT GAAACTGAAG CCGTAGCCTT GGCCATGGAA GAGCAATACA AGCCAAAATT CTCTGGCGAT ACGGTTCCGA CTGCTGCGGT ATCTTGCGCA GTAGCTTTAG CGGATAAACT CGATACCTTA GTGGGTATCT TCGGTATTGG TCAGGCACCT AAGGGAGCAG CCGACCCATT CGCACTGCGC CGCGCAGCTA TCGGTGTGCT ACGCATTATC GTTGAGAACA AGCTACCACT GGACTTAGTG ACCCTAATTG CTAAGGCTCA GGAGCTCCAT GGAACCAACT TAAGCAACGC GAATGCAAGC GATGAAGTGC TTGAGTTCTT GATGGCGCGT TTCCGTGCTT GGTACCAAGA TAAAGGTATC GATGTTGACG TGATCCTCGC CGTATTAGCA CGCCGCCCAA CTCGCCCAGC TGATTTTGAT AGCCGTATCA ATGCGGTATC ACACTTCAGA AGCTTAGAAG CCTCTAGTGC TCTGGCTGCG GCGAATAAGC GTGTGTCTAA CATTCTGGCG AAAGTGGAAG GCGAATTACC TACCGCGATT AACTCGGCTC TGTTAGCCGA AGCCGCAGAA CAAGCATTAG CCGCTAAGCT TGCCGAACTG CAACCTCAAC TCGCTCCACT GTTTGCAAAT GCAGATTACC AACAGGCATT AACGCTGCTG TCGAGCTTAC GTGAAAGTGT TGACCAGTTC TTCGAAGACG TGATGGTTAT GGCGGATGAC GAAGCATTGA AAAACAACCG TTTAGCACTG CTGAATAACC TACGTGAGCA GTTCTTACAT GTTGCGGATA TTTCTCTGCT TCAGTAA
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Protein sequence | MNFENLLIEL GTEELPPKAL RKLAESFLAN FTEELTKADL AFKSAAWYAA PRRLAINVTE LAIAQADKIV EKRGPAVSSA FDAEGKPTKA AEGWARGNGI TVDQAERLVT DKGEWLVYNA KVEGVETKSL IAAMAQRALD KLPIPKPMRW GSSKTQFIRP VHTATMLLGS ELIEGELLGI KSARNVRGHR FMGTGFELDH ADNYLTLLKE KGKVIADYES RKALIKADAE KAAAKIGGTA DIEDDLLEEV TSLVEWPVVL TASFEEKFLN VPSEALVYTM KGDQKYFPVF DEAGKLLPNF IFVANIESKD PAQIIAGNEK VVRPRLADAE FFFNTDKKHT LESRLPSLET VLFQQQLGTL KDKVTRISAL AAFIAEQTGA NAVDAARAGL LSKTDLMTNM VMEFTDTQGT MGMHYARLDG ETEAVALAME EQYKPKFSGD TVPTAAVSCA VALADKLDTL VGIFGIGQAP KGAADPFALR RAAIGVLRII VENKLPLDLV TLIAKAQELH GTNLSNANAS DEVLEFLMAR FRAWYQDKGI DVDVILAVLA RRPTRPADFD SRINAVSHFR SLEASSALAA ANKRVSNILA KVEGELPTAI NSALLAEAAE QALAAKLAEL QPQLAPLFAN ADYQQALTLL SSLRESVDQF FEDVMVMADD EALKNNRLAL LNNLREQFLH VADISLLQ
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