| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_R0131 |
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| Symbol | |
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| ID | 4254635 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4250508 |
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| End bp | 4253400 |
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| Gene Length | 2893 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | 640717330 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.595604 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GGTTAAGCGA CTAAGCGTAT ACGGTGGATG CCTTGGCAGT CAGAGGCGAT GAAGGACGTA
GTAACTTGCG AAAAGCGTTG GCGAGCTAGT AACAAGCATT TGAGCTAACG ATGTCCGAAT
GGGGGAACCC AGCAGCATAA GCTGTTATCA CTGCATGAAT ACATAGTGTA GTGAGGCAAA
CGAGGGGAAC TGAAACATCT AAGTACCCTT AGGAAAAGAA ATCAACCGAG ATTCCCCTAG
TAGCGGCGAG CGAACGGGGA TTAGCCCTTA AGTCAGAGGG GTGTTAGTGG AATGGTCTGG
AAAGTCCAGC GGCACAGGGT GATAGCCCCG TACACGAAAA CTAACCTTTG ATGAAAACGA
GTAAGGCGGG ACACGTGATA TCCTGTTTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT
ACTCCTGACT GACCGATAGT GAACCAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCTGTG
AGGGGAGTGA AATAGAACCT GAAACCGTAT ACGTACAAGC AGTGGGAGCG GTACTTGAGA
CCGTGACTGC GTACCTTTTG TATAATGGGT CAGCGACTTA CGTTTTGTAG CGAGGTTAAG
CGAATAGCGG AGCCGTAGGG AAACCGAGTG TTAACTGCGC GTTTAGTTGC AAGGCGTAGA
CCCGAAACCC GGTGATCTAG CCATGGGCAG GTTGAAGGTT GAGTAACATC AACTGGAGGA
CCGAACCGAC TAATGTTGAA AAATTAGCGG ATGACTTGTG GCTGGGGGTG AAAGGCCAAT
CAAACCGGGA GATATCTGGT TCTCCTCGAA AGCTATTTAG GTAGCGCCTC GGACGAACAC
CTTTGGGGGT AGAGCACTGT TAAGGCTAGG GGGTCATCCC GACTTACCAA CCCTTTGCAA
ACTCCGAATA CCAAAGAGTG CTATCCGGGA GACAGACGGC GGGTGCTAAC GTCCGTCGTC
AAAAGGGAAA CAACCCAGAC CGTCAGCTAA GGTCCCAAAG TGTATGTTAA GTGGGAAACG
ATGTGGGAAG GCTTAGACAG CTAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG
CGTAATAGCT CACTAGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAACATACCA
CCGAAGCTAC GGGTGCAATC CATTAGGGTT GCGCGGTAGA GGAGCGTTCT GTAAGCCGTT
GAAGGTGAAG GGGTAACCCA CGCTGGAGGT ATCAGAAGTG CGAATGCTGA CATGAGTAAC
GATAAAGGGG GTGAAAAACC CCCTCGCCGA AAGACCAAGG GTTCCTGTCC AACGTTAATC
GGGGCAGGGT GAGTCGACCC CTAAGGCGAG GCCGAAAGGC GTAGTCGATG GGAAACAGAT
TAATATTTCT GTACTTCCGC TAACTGCGAT GGAGAGACGG AGAAGGCTAG GCTAGCGCGG
CGTTGGTAGT CCGCGTTTAA GGTGGTAGGT GGGTGACTTA GGCAAATCCG GGTCACTATA
CACTGAGAGC TGATGACGAG TCCCCAAGGG GATGAAGTAG TTGATGCCAT GCTTCCAGGA
AAATCTTCTA AGCTTCAGGT TAGCGGGAAT CGTACCCCAA ACCGACACAG GTGGTCGGGT
AGAGAATACC AAGGCGCTTG AGAGAACTCG GCTGAAGGAA CTAGGCAAAA TGGTACCGTA
ACTTCGGGAG AAGGTACGCT GCTGTTGGTG ATGGGACTTG CTCCCTAAGC TGACGGCAGT
CGCAGATACC AGGTGGCTGC AACTGTTTAT CAAAAACACA GCACTGTGCA AAATCGCAAG
ATGACGTATA CGGTGTGACG CCTGCCCGGT GCCGGAAGGT TAATTGATTG GGTTATCGCA
AGAGAAGCTC ATGATCGAAG CCCCGGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT
AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAATGA TGGCCACGCT
GTCTCCAGCC GAGACTCAGT GAAGTTGAAA TTGCGGTGAA GATGCCGTAT ACCCGCGGCT
AGACGGAAAG ACCCCGTGAA CCTTTACTAT AGCTTGGCAC TGAACATTGA CCCTACATGT
GTAGGATAGG TGGGAGACTT TGAAGTTGGA ACGCTAGTTC TGATGGAGTC GTCCTTGAAA
TACCACCCTT GTAGTGTTGA TGTTCTAACT TGGGCCCCTA ATCGGGGTTA AGGACAGTGC
CTGGTGGGTA GTTTGACTGG GGCGGTCTCC TCCCAAAGAG TAACGGAGGA GCACGAAGGT
TGGCTAAGTA CGGTCGGACA TCGTACGGTT AGTGCAATGG CATAAGCCAG CTTAACTGCG
AGACAGACAC GTCGAGCAGG TACGAAAGTA GGTCATAGTG ATCCGGTGGT TCTGAATGGA
AGGGCCATCG CTCAACGGAT AAAAGGTACT CCGGGGATAA CAGGCTGATA CCGCCCAAGA
GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCACATCC TGGGGCTGAA
GTCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGTGGT ACGCGAGCTG GGTTCAGAAC
GTCGTGAGAC AGTTCGGTCC CTATCTGCCG TGGGCGTTGG ATGATTGAGG GGAGTTGCTC
CTAGTACGAG AGGACCGGAG TGAACGAACC GCTGGTGTTC GGGTTGTCAT GCCAATGGCA
TTGCCCGGTA GCTATGTTCG GAATCGATAA CCGCTGAAAG CATCTAAGCG GGAAGCGAGC
CCCAAGATGA GTCATCCCTT GGACTTTAAG TCCACTAAAG AGCCGTTCGA GACTAGGACG
TTGATAGGTC AGGTGTGTAA GCGTTGTGAG GCGTTGAGCT AACTGATACT AATGACTCGA
GAGGCTTAAC CAT
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| Protein sequence | |
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