Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3936 |
Symbol | |
ID | 4254499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4697488 |
End bp | 4699377 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120584 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_736056 |
Protein GI | 113972263 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.745215 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000779402 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTAGGTG GTGGTCATGC CGGAACTGAA GCCGCATTGG CTGCAGCAAG AATGGGCTCT AAAACATTAT TGCTGACGCA CAATCTTGAT ACTCTAGGAC AAATGTCATG CAACCCAGCA ATCGGTGGTA TTGGCAAAGG TCATTTGGTA AAAGAAATCG ATGCATTAGG CGGTGCAATG GCGATCGCAA CCGACTACGC AGGGATCCAA TTTAGAACCC TAAACTCGAG TAAAGGTCCA GCGGTAAGAG CGACTCGTGC TCAGGCCGAT CGCGCTCTGT ACCGTCAGAA GATCCAAAAT ATTCTGCAAA ACCAACCCAA CTTACGCATT TTTCAACAGG CAGTTGATGA TCTAGTTGTT GAGAATGACC GCGTTGTAGG TGTGATTACC CAAATGGGCT TAGCCTTCGA AGCTCCAGCC GTGGTATTAA CCGCGGGGAC TTTCCTCAGT GGTAAAATCC ATATTGGTTT AGAAAATTAC AGTGGCGGTC GTGCTGGCGA TCCACCATCA ATCGCACTCG CCCATCGCTT ACGCGAGTTG CCAATCCGTG TTGGCCGTTT AAAAACGGGT ACACCACCCC GTATCGACGC CAATACCATT GATTTTACCC AAATGACAGA GCAGAAAGGC GATACGCCAT TACCTGTGAT GTCATTTATG GGTGATGTGA GTCATCACCC GAAACAAATT TCATGTTGGA TTACACACAC CAATGAAAAG ACTCACGATA TTATTCGTGG TGGCTTAGAT CGCAGCCCTA TGTATTCAGG CGTGATCGAG GGGATTGGTC CACGTTACTG CCCTTCTATC GAAGACAAGA TCCATCGTTT TTCAGATAAA TCATCACACC AGATCTTTAT CGAACCCGAA GGATTAAATA CTAACGAGAT CTACCCTAAC GGCATCTCCA CCAGCTTGCC CTTCGATGTG CAGTTAAATC TGGTTCGTTC GATCCAAGGC ATGGAAAATG CTGAGATTGT TCGCCCTGGT TATGCTATTG AGTACGATTA TTTTGATCCA AGGGATCTTA AAAATTCGTT AGAAACCAAA ACGATCAATG GTTTGTTCTT CGCGGGCCAA ATCAACGGTA CTACGGGGTA TGAAGAAGCC GGTGCTCAAG GTTTACTCGC TGGGATGAAC GCTGCGCTGC AGGTTCAAGG CAAAGAAGCT TGGTGCCCTC GCCGTGATGA AGCTTATATC GGCGTATTGG TTGACGATTT ATCAACCTTA GGCACCAAAG AGCCCTACCG TATGTTTACC AGCCGCGCCG AATACCGCCT ACTGCTGCGT GAAGACAACG CCGATCTGCG CTTAACGGCA AAAGGTCGTG AACTGGGTCT GGTGGATGAT GCGCGTTGGG CCTCTTTCAG TGAAAAACTG GAATCGATCG AGTTAGAACT GCAACGTCTA CGTAGCCAAT GGATCCATCC AAATTCACCT TTAGTGCCAG TGTTAAATCC GCATTTAAAC ACGCCGATCT CCCGTGAAGC GTCGTTTGAA GAGTTGCTGC GTCGTCCAGA AATGGATTAC AGCAAGCTGA TGCAGATTGA AGGCTTTGGT CCAGGTCTTG CCGATCCACT CGCTGCCGAG CAAGTACAGA TCCAGGTGAA GTACTCTGGC TATATCCAAC GTCAGCAGGA AGAGATCAAC AAAGCGGTTC GTAATGAGAA CACAGGTTTG CCATTGAACC TTGATTACAA AGAGGTTCCT GGGCTTTCAA ACGAGGTTAT TGCTAAGTTA AATAGCCATA AGCCCGAAAC CATTGGCCAA GCATCGCGTA TCTCAGGTAT TACTCCGGCA GCGATTTCAA TTCTGCTAGT GCATCTGAAA AAACGCGGTT TATTACGCAA GAGTGCGTAA
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Protein sequence | MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNLD TLGQMSCNPA IGGIGKGHLV KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQPNLRI FQQAVDDLVV ENDRVVGVIT QMGLAFEAPA VVLTAGTFLS GKIHIGLENY SGGRAGDPPS IALAHRLREL PIRVGRLKTG TPPRIDANTI DFTQMTEQKG DTPLPVMSFM GDVSHHPKQI SCWITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFSDK SSHQIFIEPE GLNTNEIYPN GISTSLPFDV QLNLVRSIQG MENAEIVRPG YAIEYDYFDP RDLKNSLETK TINGLFFAGQ INGTTGYEEA GAQGLLAGMN AALQVQGKEA WCPRRDEAYI GVLVDDLSTL GTKEPYRMFT SRAEYRLLLR EDNADLRLTA KGRELGLVDD ARWASFSEKL ESIELELQRL RSQWIHPNSP LVPVLNPHLN TPISREASFE ELLRRPEMDY SKLMQIEGFG PGLADPLAAE QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLNLDYKEVP GLSNEVIAKL NSHKPETIGQ ASRISGITPA AISILLVHLK KRGLLRKSA
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