| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3936 |
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| Symbol | |
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| ID | 4254499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4697488 |
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| End bp | 4699377 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120584 |
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| Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
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| Protein accession | YP_736056 |
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| Protein GI | 113972263 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
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| TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.745215 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000779402 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCATTTTC ATGAACGGTT TGATGTTATT GTTGTAGGTG GTGGTCATGC CGGAACTGAA
GCCGCATTGG CTGCAGCAAG AATGGGCTCT AAAACATTAT TGCTGACGCA CAATCTTGAT
ACTCTAGGAC AAATGTCATG CAACCCAGCA ATCGGTGGTA TTGGCAAAGG TCATTTGGTA
AAAGAAATCG ATGCATTAGG CGGTGCAATG GCGATCGCAA CCGACTACGC AGGGATCCAA
TTTAGAACCC TAAACTCGAG TAAAGGTCCA GCGGTAAGAG CGACTCGTGC TCAGGCCGAT
CGCGCTCTGT ACCGTCAGAA GATCCAAAAT ATTCTGCAAA ACCAACCCAA CTTACGCATT
TTTCAACAGG CAGTTGATGA TCTAGTTGTT GAGAATGACC GCGTTGTAGG TGTGATTACC
CAAATGGGCT TAGCCTTCGA AGCTCCAGCC GTGGTATTAA CCGCGGGGAC TTTCCTCAGT
GGTAAAATCC ATATTGGTTT AGAAAATTAC AGTGGCGGTC GTGCTGGCGA TCCACCATCA
ATCGCACTCG CCCATCGCTT ACGCGAGTTG CCAATCCGTG TTGGCCGTTT AAAAACGGGT
ACACCACCCC GTATCGACGC CAATACCATT GATTTTACCC AAATGACAGA GCAGAAAGGC
GATACGCCAT TACCTGTGAT GTCATTTATG GGTGATGTGA GTCATCACCC GAAACAAATT
TCATGTTGGA TTACACACAC CAATGAAAAG ACTCACGATA TTATTCGTGG TGGCTTAGAT
CGCAGCCCTA TGTATTCAGG CGTGATCGAG GGGATTGGTC CACGTTACTG CCCTTCTATC
GAAGACAAGA TCCATCGTTT TTCAGATAAA TCATCACACC AGATCTTTAT CGAACCCGAA
GGATTAAATA CTAACGAGAT CTACCCTAAC GGCATCTCCA CCAGCTTGCC CTTCGATGTG
CAGTTAAATC TGGTTCGTTC GATCCAAGGC ATGGAAAATG CTGAGATTGT TCGCCCTGGT
TATGCTATTG AGTACGATTA TTTTGATCCA AGGGATCTTA AAAATTCGTT AGAAACCAAA
ACGATCAATG GTTTGTTCTT CGCGGGCCAA ATCAACGGTA CTACGGGGTA TGAAGAAGCC
GGTGCTCAAG GTTTACTCGC TGGGATGAAC GCTGCGCTGC AGGTTCAAGG CAAAGAAGCT
TGGTGCCCTC GCCGTGATGA AGCTTATATC GGCGTATTGG TTGACGATTT ATCAACCTTA
GGCACCAAAG AGCCCTACCG TATGTTTACC AGCCGCGCCG AATACCGCCT ACTGCTGCGT
GAAGACAACG CCGATCTGCG CTTAACGGCA AAAGGTCGTG AACTGGGTCT GGTGGATGAT
GCGCGTTGGG CCTCTTTCAG TGAAAAACTG GAATCGATCG AGTTAGAACT GCAACGTCTA
CGTAGCCAAT GGATCCATCC AAATTCACCT TTAGTGCCAG TGTTAAATCC GCATTTAAAC
ACGCCGATCT CCCGTGAAGC GTCGTTTGAA GAGTTGCTGC GTCGTCCAGA AATGGATTAC
AGCAAGCTGA TGCAGATTGA AGGCTTTGGT CCAGGTCTTG CCGATCCACT CGCTGCCGAG
CAAGTACAGA TCCAGGTGAA GTACTCTGGC TATATCCAAC GTCAGCAGGA AGAGATCAAC
AAAGCGGTTC GTAATGAGAA CACAGGTTTG CCATTGAACC TTGATTACAA AGAGGTTCCT
GGGCTTTCAA ACGAGGTTAT TGCTAAGTTA AATAGCCATA AGCCCGAAAC CATTGGCCAA
GCATCGCGTA TCTCAGGTAT TACTCCGGCA GCGATTTCAA TTCTGCTAGT GCATCTGAAA
AAACGCGGTT TATTACGCAA GAGTGCGTAA
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| Protein sequence | MHFHERFDVI VVGGGHAGTE AALAAARMGS KTLLLTHNLD TLGQMSCNPA IGGIGKGHLV
KEIDALGGAM AIATDYAGIQ FRTLNSSKGP AVRATRAQAD RALYRQKIQN ILQNQPNLRI
FQQAVDDLVV ENDRVVGVIT QMGLAFEAPA VVLTAGTFLS GKIHIGLENY SGGRAGDPPS
IALAHRLREL PIRVGRLKTG TPPRIDANTI DFTQMTEQKG DTPLPVMSFM GDVSHHPKQI
SCWITHTNEK THDIIRGGLD RSPMYSGVIE GIGPRYCPSI EDKIHRFSDK SSHQIFIEPE
GLNTNEIYPN GISTSLPFDV QLNLVRSIQG MENAEIVRPG YAIEYDYFDP RDLKNSLETK
TINGLFFAGQ INGTTGYEEA GAQGLLAGMN AALQVQGKEA WCPRRDEAYI GVLVDDLSTL
GTKEPYRMFT SRAEYRLLLR EDNADLRLTA KGRELGLVDD ARWASFSEKL ESIELELQRL
RSQWIHPNSP LVPVLNPHLN TPISREASFE ELLRRPEMDY SKLMQIEGFG PGLADPLAAE
QVQIQVKYSG YIQRQQEEIN KAVRNENTGL PLNLDYKEVP GLSNEVIAKL NSHKPETIGQ
ASRISGITPA AISILLVHLK KRGLLRKSA
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