Gene Shewmr4_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3932 
Symbol 
ID4254495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4694390 
End bp4694773 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content46% 
IMG OID638120580 
ProductATP synthase I chain 
Protein accessionYP_736052 
Protein GI113972259 
COG category[C] Energy production and conversion 
COG ID[COG3312] F0F1-type ATP synthase, subunit I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000705136 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00525591 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGTAAGG TTTTAGCGCG TCGTGGCCGG TGGTCAGCCT ATAAATTGGT GATGATGCAG 
GCGGCGGTGG CTGGGGGTGC TTCAATTCTC TTTTTCGTCG TGTGGGGAGT TCAGTTTGGC
TATTCTGCGT TAGCAGGTGG TTCAATTGCT GTGCTCCCTA ATTTTGTATT CGCGACCCTC
GCTTTCTCTC ATACGGGAGC AAGTTCAGCT GCAAAAGTGA TTAAAACTTT TTACTGGGGG
GAAGCGGTAA AGTTGCTGTT AACCATCGCA ATGTTTTCAT TGGTGTTTAG CAAGCTTGAG
GTGGCATTTA TGCCGCTTTT TGTTTGTTAT GTGCTGACGT TGATAGTGCA TTGGACAGCA
CCTTTATACT TCAAGCAAAG TTAA
 
Protein sequence
MSKVLARRGR WSAYKLVMMQ AAVAGGASIL FFVVWGVQFG YSALAGGSIA VLPNFVFATL 
AFSHTGASSA AKVIKTFYWG EAVKLLLTIA MFSLVFSKLE VAFMPLFVCY VLTLIVHWTA
PLYFKQS