| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3929 |
|---|
| Symbol | |
|---|
| ID | 4254492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4692752 |
|---|
| End bp | 4693222 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638120577 |
|---|
| Product | F0F1 ATP synthase subunit B |
|---|
| Protein accession | YP_736049 |
|---|
| Protein GI | 113972256 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0711] F0F1-type ATP synthase, subunit b |
|---|
| TIGRFAM ID | [TIGR01144] ATP synthase, F0 subunit b |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.016356 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00620185 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTCA ACGCTACCCT AATCGGTCAG ACGGTCGCCT TTATCATCTT CGTGTGGTTC
TGCATGAAGT TTGTATGGCC CCCTTTGATG AATGCCATCG AAGCGCGCCA AAAAAGGATT
GCTGACGGTC TAGCTGATGC TGATCGTGCG GTAAAAGACC TGGAGTTGGC TCAAGCGAAA
GCGACTGACC AACTAAAAGA AGCCAAGGTG ACTGCTAACG AAATTATTGA GCAAGCTAAC
AAGCGTAAAG CTCAAATAGT TGAAGAAGCT AAAGCCGAAG CAGACGCTGA GCGTGCAAAA
ATCATCGCTC AGGGTAAAGC AGAAATTGAA GCTGAACGTA ATCGCGTGAA AGAGGATCTG
CGTAAGCAGG TTGCTACTCT TGCCATCATG GGTGCTGAGA AGATCCTTGA GCGTTCTATT
GATCCAGCCG CCCACAGTGA CATAGTTAAT AAACTAGTCG CTGAAATTTG A
|
|---|
| Protein sequence | MNFNATLIGQ TVAFIIFVWF CMKFVWPPLM NAIEARQKRI ADGLADADRA VKDLELAQAK
ATDQLKEAKV TANEIIEQAN KRKAQIVEEA KAEADAERAK IIAQGKAEIE AERNRVKEDL
RKQVATLAIM GAEKILERSI DPAAHSDIVN KLVAEI
|
|---|
| |