| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3928 |
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| Symbol | |
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| ID | 4254491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4692202 |
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| End bp | 4692735 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120576 |
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| Product | F0F1 ATP synthase subunit delta |
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| Protein accession | YP_736048 |
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| Protein GI | 113972255 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0640299 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00610121 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTGAAT TAACCACCAT CGCTCGCCCT TACGCAAAGG CAGCTTTTGA CGTTGCTGTT
GAACATAATG CAGTGGATAC CTGGGCAGAA ATGCTCACGT TTGCCGCACT GGTTAGTGAA
AACGAAACCA TGCAGCCACT GCTAACTGGC TCTTTAGCTA GTACAAAACT TGCCGCACTC
TTTATTAGTG TGTGTGGTGA GCAAATCAAT GAGCAAGGTC AGAACTTGAT AAAGGTAATG
GCTGAAAACG GTCGCTTAAA GGTACTACCT GCTGTATCTG AGCTTTTTGC TCAATACCGT
AATGAGTGGG CAAAAGAAGT GGAAGCCGAT GTGGTTTCTG CAGCTGAGCT CAGCTCTGAA
CAAAAGCAGC AGATCAGTAT TTCTTTAGAG AAACGTCTCG CACGCAAAGT TAAGCTGAAT
TGCAGCACTG ACGCCGCGCT CATCGCCGGT GTAATTATTA AGGCAGGTGA CTTAGTCATT
GATGGCTCTG TCCGCGGTAA GTTATCGCGT CTGTCTGAAA AGCTGCAGTC GTAA
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| Protein sequence | MAELTTIARP YAKAAFDVAV EHNAVDTWAE MLTFAALVSE NETMQPLLTG SLASTKLAAL
FISVCGEQIN EQGQNLIKVM AENGRLKVLP AVSELFAQYR NEWAKEVEAD VVSAAELSSE
QKQQISISLE KRLARKVKLN CSTDAALIAG VIIKAGDLVI DGSVRGKLSR LSEKLQS
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