| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3927 |
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| Symbol | |
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| ID | 4254490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4690646 |
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| End bp | 4692187 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120575 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_736047 |
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| Protein GI | 113972254 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0480758 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0183587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACTGA AATCAGCGAT CTGATTAAGC AGCGGATCGA GCAGTTCGAA
GTCGTTAGCG AATCTCGTAA CGAAGGTACT ATCGTTGCGG TTAGTGACGG CATTATCCGC
ATCCACGGCC TAGCCGATGT GATGCAAGGT GAAATGATCG AACTGCCTGG TAGCCGTTTT
GCAATCGCGT TGAACCTTGA ACGTGATTCT GTCGGTGCCG TAGTAATGGG TCCTTATGCT
GATTTAGCAG AGGGCGTAAA AGTTAAAACT ACTGGCCGTA TTCTGGAAGT TCCAGTCGGT
CGCGGCCTAT TAGGCCGTGT AGTTAACACT CTGGGTGAGC CAATTGACGG AAAAGGCGCT
ATCGACAACG ATGGTTTCTC TCCTGTTGAA GTGATCGCAC CAGGTGTTAT CGAGCGTAAG
TCAGTAGATC AACCAGTTCA AACTGGTTAT AAAGCCGTTG ACGCTATGAT CCCAATCGGT
CGTGGCCAAC GTGAATTGAT CATTGGCGAC CGTCAAACTG GTAAAACAGC TATGGCGATC
GACGCAATCA TCAACCAGCG CGATTCTGGC ATCAAATGTG TGTACGTAGC TGTAGGCCAA
AAGGCTTCTA CTATTGCTAA CGTAGTACGC AAGCTAGAAG AGCACGGTGC ATTAGCTAAC
ACTATCGTTG TAGTAGCAAC AGCTTCTGAA GCTGCGGCAC TGCAATACTT AGCACCATAC
TCTGGTTGTG CTATGGGTGA ATACTTCCGC GACCGCGGTG AAGATGCTCT GATCGTATAC
GATGACCTGT CTAAGCAAGC AGTTGCTTAC CGTCAGATCT CGTTACTGCT GAAGCGTCCA
CCAGGCCGTG AAGCTTATCC TGGTGACGTA TTCTATCTAC ACTCTCGTTT ATTAGAGCGT
GCTTCACGCG TAAACGAAGA ATATGTAGAA AAGTTCACTA AGGGTGCTGT AACAGGTCAA
ACCGGTTCTT TAACCGCGCT GCCTATTATT GAAACTCAGG CGGGTGACGT ATCTGCATTC
GTACCGACCA ACGTAATTTC TATTACTGAC GGTCAGATCT TCCTTGAGAC CGATCTGTTT
AACTCTGGCT TACGTCCAGC GGTTAACCCA GGTATTTCTG TTTCTCGTGT TGGTGGTGCG
GCTCAGACTA AGATCATCAA GAAACTGTCT GGTGGTATCC GTACCGCTCT AGCACAGTAT
CGTGAACTTG CTGCGTTCTC ACAGTTTGCA TCTGACTTAG ACGATGCAAC TCGTGCTCAA
CTTGAGCATG GTGTGCGTGT TACCGAACTG ATGAAGCAAA AACAATATGC TCCTATGAGC
GTAGCCGCTC AAGCTGTGTC TATTTTCGCA GCTGAAAAAG GTTACCTGAA GGGCGTTGAG
CTGAACAAAG TTGGTGATTT CGAAGCCGCT CTGCTCTCGT ACATGAACAG CGAGCATGCT
GCTTTAATCA AGCTTATCAA CGAGACTGGC GATTATAACG CCGATATCGA AGCTGAATTA
AAAGCTGGCC TCGACAAGTT CGTAGCAACC CAAACCTGGT AA
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| Protein sequence | MQLNSTEISD LIKQRIEQFE VVSESRNEGT IVAVSDGIIR IHGLADVMQG EMIELPGSRF
AIALNLERDS VGAVVMGPYA DLAEGVKVKT TGRILEVPVG RGLLGRVVNT LGEPIDGKGA
IDNDGFSPVE VIAPGVIERK SVDQPVQTGY KAVDAMIPIG RGQRELIIGD RQTGKTAMAI
DAIINQRDSG IKCVYVAVGQ KASTIANVVR KLEEHGALAN TIVVVATASE AAALQYLAPY
SGCAMGEYFR DRGEDALIVY DDLSKQAVAY RQISLLLKRP PGREAYPGDV FYLHSRLLER
ASRVNEEYVE KFTKGAVTGQ TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLETDLF
NSGLRPAVNP GISVSRVGGA AQTKIIKKLS GGIRTALAQY RELAAFSQFA SDLDDATRAQ
LEHGVRVTEL MKQKQYAPMS VAAQAVSIFA AEKGYLKGVE LNKVGDFEAA LLSYMNSEHA
ALIKLINETG DYNADIEAEL KAGLDKFVAT QTW
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